The first crystal structure of a macromolecular assembly under high pressure: CpMV at 330 MPa

被引:48
作者
Girard, E
Kahn, R
Mezouar, M
Dhaussy, AC
Lin, TW
Johnson, JE
Fourme, R
机构
[1] Synchrotron SOLEIL, Gif Sur Yvette, France
[2] Inst Biol Struct, Grenoble, France
[3] European Synchrotron Radiat Facil, F-38043 Grenoble, France
[4] Scripps Res Inst, Dept Mol Biol, La Jolla, CA USA
关键词
D O I
10.1529/biophysj.104.058636
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
The structure of cubic Cowpea mosaic virus crystals, compressed at 330 MPa in a diamond anvil cell, was refined at 2.8 angstrom from data collected using ultrashort-wavelength (0.331 angstrom) synchrotron radiation. With respect to the structure at atmospheric pressure, order is increased with lower Debye Waller factors and a larger number of ordered water molecules. Hydrogen-bond lengths are on average shorter and the cavity volume is strongly reduced. A tentative mechanistic explanation is given for the coexistence of disordered and ordered cubic crystals in crystallization drops and for the disorder-order transition observed in disordered crystals submitted to high pressure. Based on such explanation, it can be concluded that pressure would in general improve, albeit to a variable extent, the order in macromolecular crystals.
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收藏
页码:3562 / 3571
页数:10
相关论文
共 44 条
[1]   High pressure effects on biological macromolecules: from structural changes to alteration of cellular processes [J].
Balny, C ;
Masson, P ;
Heremans, K .
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEIN STRUCTURE AND MOLECULAR ENZYMOLOGY, 2002, 1595 (1-2) :3-10
[2]   FREE R-VALUE - A NOVEL STATISTICAL QUANTITY FOR ASSESSING THE ACCURACY OF CRYSTAL-STRUCTURES [J].
BRUNGER, AT .
NATURE, 1992, 355 (6359) :472-475
[3]  
Brunger AT, 1998, ACTA CRYSTALLOGR D, V54, P905, DOI 10.1107/s0907444998003254
[4]   DYNAMIC PROPERTIES OF BOVINE PANCREATIC TRYPSIN-INHIBITOR FROM A MOLECULAR-DYNAMICS SIMULATION AT 5000-ATM [J].
BRUNNE, RM ;
VANGUNSTEREN, WF .
FEBS LETTERS, 1993, 323 (03) :215-217
[5]  
*CCCP4, 1994, ACTA CRYSTALLOGR D, V50, P760
[6]   THE MOLECULAR-SURFACE PACKAGE [J].
CONNOLLY, ML .
JOURNAL OF MOLECULAR GRAPHICS & MODELLING, 1993, 11 (02) :139-143
[7]   THERMODYNAMIC FLUCTUATIONS IN PROTEIN MOLECULES [J].
COOPER, A .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1976, 73 (08) :2740-2741
[8]  
Delano WL., 2002, The PyMOL Molecular Graphics System
[9]   Further additions to MolScript version 1.4, including reading and contouring of electron-density maps [J].
Esnouf, RM .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1999, 55 :938-940
[10]   Using a quasi-parallel X-ray beam of ultrashort wavelength for high-pressure virus crystallography:: implications for standard macromolecular crystallography [J].
Fourme, R ;
Girard, É ;
Kahn, R ;
Ascone, I ;
Mezouar, M ;
Dhaussy, AC ;
Lin, T ;
Johnson, JE .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2003, 59 :1767-1772