Identification of human basic fetoprotein as glucose-6-phosphate isomerase by using N- and C-terminal sequence tags and terminal tag database

被引:1
|
作者
Kuyama, Hiroki [1 ]
Yoshizawa, Akiyasu C. [1 ]
Nakajima, Chihiro [1 ]
Hosako, Mutsumi [1 ]
Tanaka, Koichi [1 ]
机构
[1] Shimadzu Co Ltd, Koichi Tanaka Lab Adv Sci & Technol, Nakagyo Ku, Kyoto 6048511, Japan
基金
日本学术振兴会;
关键词
Basic fetoprotein; N- and C-terminal sequencing; MALDI mass spectrometry; Terminal tag database; protein identification; DESORPTION/IONIZATION MASS-SPECTROMETRY; PROTEIN IDENTIFICATION; ARGININE RESIDUES; CARBOXYLIC-ACIDS; PEPTIDES; DERIVATIZATION; FRAGMENTATION; DERIVATIVES; CONVERSION; DIGESTS;
D O I
10.1016/j.jpba.2015.04.032
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
Human basic fetoprotein (BFP), found in fetal serum and tissue extracts as well as in extracts of various cancer tissues, has long been known as a marker protein for cancers; however, the primary sequence has not yet been reported. This paper describes the identification of BFP using the N- and C-terminal amino acid sequence tags (Ac-AALTRDPQFQ and QQREARVQ respectively) clarified by mass spectrometry-based methods, and a terminal tag database (ProteinCarta). In this study, BFP was identified as glucose-6-phosphate isomerase (G6PI_HUMAN). (C) 2015 Elsevier B.V. All rights reserved.
引用
收藏
页码:116 / 125
页数:10
相关论文
共 16 条
  • [1] Protein identification with N and C-terminal sequence tags in proteome projects
    Wilkins, MR
    Gasteiger, E
    Tonella, L
    Ou, K
    Tyler, M
    Sanchez, JC
    Gooley, AA
    Walsh, BJ
    Bairoch, A
    Appel, RD
    Williams, KL
    Hochstrasser, DF
    JOURNAL OF MOLECULAR BIOLOGY, 1998, 278 (03) : 599 - 608
  • [2] An overview of the sequence features of N- and C-terminal segments of the human chemokine receptors
    Raucci, Raffaele
    Costantini, Susan
    Castello, Giuseppe
    Colonna, Giovanni
    CYTOKINE, 2014, 70 (02) : 141 - 150
  • [3] Terminal proteomics: N- and C-terminal analyses for high-fidelity identification of proteins using MS
    Nakazawa, Takashi
    Yamaguchi, Minoru
    Okamura, Taka-aki
    Ando, Eiji
    Nishimura, Osamu
    Tsunasawa, Susumu
    PROTEOMICS, 2008, 8 (04) : 673 - 685
  • [4] PROTEIN STRUCTURE AND ENZYMATIC ACTIVITY .10. N-TERMINAL AND C-TERMINAL ENDGROUPS OF GLUCOSE-6-PHOSPHATE DEHYDROGENASE FROM CANDIDA-UTILIS
    DOMAGK, GF
    DOMSCHKE, W
    MEYER, J
    WEISE, M
    HOPPE-SEYLERS ZEITSCHRIFT FUR PHYSIOLOGISCHE CHEMIE, 1970, 351 (08): : 923 - &
  • [5] Saccharomyces cerevisiae expression vectors with thrombin-cleavable N- and C-terminal 6x(His) tags
    Onisha Patel
    Ross Fernley
    Ian Macreadie
    Biotechnology Letters, 2003, 25 : 331 - 334
  • [6] Saccharomyces cerevisiae expression vectors with thrombin-cleavable N- and C-terminal 6x(His) tags
    Patel, O
    Fernley, R
    Macreadie, I
    BIOTECHNOLOGY LETTERS, 2003, 25 (04) : 331 - 334
  • [7] RAT-BRAIN HEXOKINASE - GLUCOSE AND GLUCOSE-6-PHOSPHATE BINDING-SITES AND C-TERMINAL AMINO-ACID OF PURIFIED ENZYME
    CHOU, AC
    WILSON, JE
    ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 1974, 165 (02) : 628 - 633
  • [8] Effects of N-/C-Terminal Extra Tags on the Optimal Reaction Conditions, Activity, and Quaternary Structure of Bacillus thuringiensis Glucose 1-Dehydrogenase
    Hyun, Jeongwoo
    Abigail, Maria
    Choo, Jin Woo
    Ryu, Jin
    Kim, Hyung Kwoun
    JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY, 2016, 26 (10) : 1708 - 1716
  • [9] RESIDUES PUTATIVELY INVOLVED IN BINDING OF ATP AND GLUCOSE-6-PHOSPHATE TO A MAMMALIAN HEXOKINASE - SITE-DIRECTED MUTATION AT ANALOGOUS POSITIONS IN THE N-TERMINAL AND C-TERMINAL HALVES OF THE TYPE-I ISOZYME
    BAIJAL, M
    WILSON, JE
    ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 1995, 321 (02) : 413 - 420
  • [10] Identification of a phosphate regulatory site and a low affinity binding site for glucose 6-phosphate in the N-terminal half of human brain hexokinase
    Fang, TY
    Alechina, O
    Aleshin, AE
    Fromm, HJ
    Honzatko, RB
    JOURNAL OF BIOLOGICAL CHEMISTRY, 1998, 273 (31) : 19548 - 19553