Fermentation optimization of cellulase production from sugarcane bagasse by Bacillus pseudomycoides and molecular modeling study of cellulase

被引:56
作者
Pramanik, Sajib Kumar [1 ]
Mahmud, Shafi [1 ]
Paul, Gobindo Kumar [1 ]
Jabin, Tabassum [1 ]
Naher, Kamrun [1 ]
Uddin, Md. Salah [1 ]
Zaman, Shahriar [1 ]
Abu Saleh, Md. [1 ]
机构
[1] Rajshahi Univ, Dept Genet Engn & Biotechnol, Microbiol Lab, Rajshahi 6205, Bangladesh
来源
CURRENT RESEARCH IN MICROBIAL SCIENCES | 2021年 / 2卷
关键词
Cellulase; Sugarcane bagasse; Fermentation; Bacillus pseudomycoides; Homology modeling;
D O I
10.1016/j.crmicr.2020.100013
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Degradation of cellulosic carbon, the most important natural carbon reservoirs on this planet by cellulase is very essential for valuable soluble sugars. This cellulase has potential biotechnological applications in many industrial sectors. Thus the demand of cellulase is increasing more frequently than ever. Agro industrial byproducts and suitable microbes are of an important source for the production of cellulase. Bacillus pseudomycoides and sugarcane bagasse were used for the production of cellulase and different process parameters influencing the production of cellulase were optimized here. The bacterium showed maximum cellulase production in the presence of sugarcane bagasse, peptone and magnesium sulfate at pH 7, 40 degrees C in 72 h of incubation. Primary structures of the cellulase is consists of 400 amino acid residues having molecular weight 44,790 Dalton and the theoretical PI is 9.11. Physiochemical properties of cellulase indicated that the protein has instability index 25.77. Seven hydrogen bonds were observed at multiple sites of the cellulase enzyme; His269, Asp237, Asn235, Tyr271, Ser272, Gln309, Asn233. This protein structure may play first hand in further development of exploring cellulase and cellulose interaction dynamics in Bacillus sp. Thus this bacterium may be useful in various industrial applications owing to its cellulase producing capability.
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页数:7
相关论文
共 44 条
[1]   Optimization of Fermentation Conditions for Cellulases Production by Bacillus licheniformis MVS1 and Bacillus sp MVS3 Isolated from Indian Hot Spring [J].
Acharya, Somen ;
Chaudhary, Anita .
BRAZILIAN ARCHIVES OF BIOLOGY AND TECHNOLOGY, 2012, 55 (04) :497-503
[2]   Effect of alkaline treatments at various temperatures on cellulase and biomass production using submerged sugarcane bagasse fermentation with Trichoderma reesei QM 9414 [J].
Aiello, C ;
Ferrer, A ;
Ledesma, A .
BIORESOURCE TECHNOLOGY, 1996, 57 (01) :13-18
[3]  
Arijit Das Arijit Das, 2010, American-Eurasian Journal of Agricultural and Environmental Science, V8, P685
[4]   UniProt: the universal protein knowledgebase [J].
Bateman, Alex ;
Martin, Maria Jesus ;
O'Donovan, Claire ;
Magrane, Michele ;
Alpi, Emanuele ;
Antunes, Ricardo ;
Bely, Benoit ;
Bingley, Mark ;
Bonilla, Carlos ;
Britto, Ramona ;
Bursteinas, Borisas ;
Bye-A-Jee, Hema ;
Cowley, Andrew ;
Da Silva, Alan ;
De Giorgi, Maurizio ;
Dogan, Tunca ;
Fazzini, Francesco ;
Castro, Leyla Garcia ;
Figueira, Luis ;
Garmiri, Penelope ;
Georghiou, George ;
Gonzalez, Daniel ;
Hatton-Ellis, Emma ;
Li, Weizhong ;
Liu, Wudong ;
Lopez, Rodrigo ;
Luo, Jie ;
Lussi, Yvonne ;
MacDougall, Alistair ;
Nightingale, Andrew ;
Palka, Barbara ;
Pichler, Klemens ;
Poggioli, Diego ;
Pundir, Sangya ;
Pureza, Luis ;
Qi, Guoying ;
Rosanoff, Steven ;
Saidi, Rabie ;
Sawford, Tony ;
Shypitsyna, Aleksandra ;
Speretta, Elena ;
Turner, Edward ;
Tyagi, Nidhi ;
Volynkin, Vladimir ;
Wardell, Tony ;
Warner, Kate ;
Watkins, Xavier ;
Zaru, Rossana ;
Zellner, Hermann ;
Xenarios, Ioannis .
NUCLEIC ACIDS RESEARCH, 2017, 45 (D1) :D158-D169
[5]   QMEAN server for protein model quality estimation [J].
Benkert, Pascal ;
Kuenzli, Michael ;
Schwede, Torsten .
NUCLEIC ACIDS RESEARCH, 2009, 37 :W510-W514
[6]   The Protein Data Bank [J].
Berman, HM ;
Westbrook, J ;
Feng, Z ;
Gilliland, G ;
Bhat, TN ;
Weissig, H ;
Shindyalov, IN ;
Bourne, PE .
NUCLEIC ACIDS RESEARCH, 2000, 28 (01) :235-242
[7]   Cellulases and related enzymes in biotechnology [J].
Bhat, MK .
BIOTECHNOLOGY ADVANCES, 2000, 18 (05) :355-383
[8]   SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information [J].
Biasini, Marco ;
Bienert, Stefan ;
Waterhouse, Andrew ;
Arnold, Konstantin ;
Studer, Gabriel ;
Schmidt, Tobias ;
Kiefer, Florian ;
Cassarino, Tiziano Gallo ;
Bertoni, Martino ;
Bordoli, Lorenza ;
Schwede, Torsten .
NUCLEIC ACIDS RESEARCH, 2014, 42 (W1) :W252-W258
[9]  
Biovia D. S., 2017, DISCOVERY STUDIO VIS, DOI DOI 10.1002/CPE.6086
[10]   Estimating the Willingness to Pay to Avoid Violent Crime: A Dynamic Approach [J].
Bishop, Kelly C. ;
Murphy, Alvin D. .
AMERICAN ECONOMIC REVIEW, 2011, 101 (03) :625-629