Altered expression of mir-222 and mir-25 influences diverse gene expression changes in transformed normal and anaplastic thyroid cells, and impacts on MEK and TRAIL protein expression

被引:11
作者
Aherne, Sinead T. [1 ]
Smyth, Paul [2 ]
Freeley, Michael [3 ,4 ]
Smith, Leila [5 ]
Spillane, Cathy [2 ]
O'leary, John [2 ]
Sheils, Orla [2 ]
机构
[1] Dublin City Univ, Natl Inst Cellular Biotechnol, Collins Ave, Dublin 9, Ireland
[2] Trinity Coll Dublin, Dept Histopathol, Dublin 8, Ireland
[3] Trinity Coll Dublin, Dept Clin Med, Dublin 8, Ireland
[4] Trinity Coll Dublin, Trinity Translat Med Inst, Dublin 8, Ireland
[5] Fluidigm Corp, Suite 100, San Francisco, CA 94080 USA
基金
爱尔兰科学基金会;
关键词
thyroid cancer; miR-222 and miR-25; microarray; target genes; mitogen-activated protein kinase kinase 4 and TNF-related apoptosis-inducing ligand; APOPTOSIS-INDUCING LIGAND; PAPILLARY CARCINOMAS; TARGET RECOGNITION; DOWN-REGULATION; BREAST-CANCER; MICRORNAS; KINASE; DEATH; CLUSTERS; TUMORS;
D O I
10.3892/ijmm.2016.2653
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
Thyroid cancer is the most common endocrine malignancy and accounts for the majority of endocrine cancer-related deaths each year. Our group and others have previously demonstrated dysfunctional microRNA (miRNA or miR) expression in the context of thyroid cancer. The objective of the present study was to investigate the impact of synthetic manipulation of expression of miR-25 and miR-222 in benign and malignant thyroid cells. miR-25 and miR-222 expression was upregulated in 8505C (an anaplastic thyroid cell line) and Nthy-ori (a SV40-immortalised thyroid cell line) cells, respectively. A transcriptomics-based approach was utilised to identify targets of the two miRNAs and real-time PCR and western blotting were used to validate a subset of the targets. Almost 100 mRNAs of diverse functions were found to be either directly or indirectly targeted by both miR-222 and miR-25 [fold change 2, false discovery rate (FDR) 0.05]. Gene ontology analysis showed the miR-25 gene target list to be significantly enriched for genes involved in cell adhesion. Fluidigm real-time PCR technologies were used to validate the downregulation of 23 and 22 genes in response to miR-25 and miR-222 overexpression, respectively. The reduction of the expression of two miR-25 protein targets, TNF-related apoptosis-inducing ligand (TRAIL) and mitogen-activated protein kinase kinase 4 (MEK4), was also validated. Manipulating the expression of both miR-222 and miR-25 influenced diverse gene expression changes in thyroid cells. Increased expression of miR-25 reduced MEK4 and TRAIL protein expression, and cell adhesion and apoptosis are important aspects of miR-25 functioning in thyroid cells.
引用
收藏
页码:433 / 445
页数:13
相关论文
共 39 条
[11]   Effects of β4 integrin expression on microRNA patterns in breast cancer [J].
Gerson, Kristin D. ;
Maddula, V. S. R. Krishna ;
Seligmann, Bruce E. ;
Shearstone, Jeffrey R. ;
Khan, Ashraf ;
Mercurio, Arthur M. .
BIOLOGY OPEN, 2012, 1 (07) :658-666
[12]   The role of microRNA genes in papillary thyroid carcinoma [J].
He, HL ;
Jazdzewski, K ;
Li, W ;
Liyanarachchi, S ;
Nagy, R ;
Volinia, S ;
Calin, GA ;
Liu, CG ;
Franssila, K ;
Suster, S ;
Kloos, RT ;
Croce, CM ;
de la Chapelle, A .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (52) :19075-19080
[13]   Exploration, normalization, and summaries of high density oligonucleotide array probe level data [J].
Irizarry, RA ;
Hobbs, B ;
Collin, F ;
Beazer-Barclay, YD ;
Antonellis, KJ ;
Scherf, U ;
Speed, TP .
BIOSTATISTICS, 2003, 4 (02) :249-264
[14]   The miR-106b-25 Polycistron, Activated by Genomic Amplification, Functions as an Oncogene by Suppressing p21 and Bim [J].
Kan, Takatsugu ;
Sato, Fumiaki ;
Ito, Tetsuo ;
Matsumura, Nobutoshi ;
David, Stefan ;
Cheng, Yulan ;
Agarwal, Rachana ;
Paun, Bogdan C. ;
Jin, Zhe ;
Olaru, Alexandru V. ;
Selaru, Florin M. ;
Hamilton, James P. ;
Yang, Jian ;
Abraham, John M. ;
Mori, Yuriko ;
Meltzer, Stephen J. .
GASTROENTEROLOGY, 2009, 136 (05) :1689-1700
[15]   A Panel of Four miRNAs Accurately Differentiates Malignant from Benign Indeterminate Thyroid Lesions on Fine Needle Aspiration [J].
Keutgen, Xavier M. ;
Filicori, Filippo ;
Crowley, Michael J. ;
Wang, Yongchun ;
Scognamiglio, Theresa ;
Hoda, Rana ;
Buitrago, Daniel ;
Cooper, David ;
Zeiger, Martha A. ;
Zarnegar, Rasa ;
Elemento, Olivier ;
Fahey, Thomas J., III .
CLINICAL CANCER RESEARCH, 2012, 18 (07) :2032-2038
[16]   In Vivo Imaging of Functional Targeting of miR-221 in Papillary Thyroid Carcinoma [J].
Kim, Hyun Joo ;
Kim, Young Ha ;
Lee, Dong Soo ;
Chung, June-Key ;
Kim, Soonhag .
JOURNAL OF NUCLEAR MEDICINE, 2008, 49 (10) :1686-1693
[17]   Functional links between clustered microRNAs: suppression of cell-cycle inhibitors by microRNA clusters in gastric cancer [J].
Kim, Young-Kook ;
Yu, Jieun ;
Han, Tae Su ;
Park, Seong-Yeon ;
Namkoong, Bumjin ;
Kim, Dong Hyuk ;
Hur, Keun ;
Yoo, Moon-Won ;
Lee, Hyuk-Joon ;
Yang, Han-Kwang ;
Kim, V. Narry .
NUCLEIC ACIDS RESEARCH, 2009, 37 (05) :1672-1681
[18]   Diagnostic value of integrin α3, β4, and β5 gene expression levels for the clinical outcome of tongue squamous cell carcinoma [J].
Kurokawa, Akira ;
Nagata, Masaki ;
Kitamura, Nobutaka ;
Noman, Arhab A. ;
Ohnishi, Makoto ;
Ohyama, Tokio ;
Kobayashi, Takanori ;
Shingaki, Susumu ;
Takagi, Ritsuo .
CANCER, 2008, 112 (06) :1272-1281
[19]   Prediction of mammalian microRNA targets [J].
Lewis, BP ;
Shih, IH ;
Jones-Rhoades, MW ;
Bartel, DP ;
Burge, CB .
CELL, 2003, 115 (07) :787-798
[20]   Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs [J].
Lim, LP ;
Lau, NC ;
Garrett-Engele, P ;
Grimson, A ;
Schelter, JM ;
Castle, J ;
Bartel, DP ;
Linsley, PS ;
Johnson, JM .
NATURE, 2005, 433 (7027) :769-773