Detection of regime shifts in the environment: testing "STARS" using synthetic and observed time series

被引:19
作者
Stirnimann, Luca [1 ,2 ]
Conversi, Alessandra [1 ,3 ]
Marini, Simone [3 ,4 ]
机构
[1] Plymouth Univ, Marine Inst, Plymouth PL48AA, Devon, England
[2] Univ Cape Town, Dept Oceanog, ZA-7701 Cape Town, South Africa
[3] CNR, ISMAR Lerici, Forte Santa Teresa, I-19032 Lerici Sp, Liguria, Italy
[4] Stn Zoolog Anton Dohrn SZN, I-80121 Naples, Italy
关键词
Calanus finmarchicus; marine ecology; oceanography; phase shift; regime shift; ROC curve; sequential regime shifts detection method; sequential t-test analysis method; STARS; time series; LONG-TERM CHANGES; CALANUS-FINMARCHICUS; MARINE ECOSYSTEMS; CLIMATE; ATLANTIC; OCEAN; SEA; PRODUCTIVITY; VARIABILITY; DYNAMICS;
D O I
10.1093/icesjms/fsz148
中图分类号
S9 [水产、渔业];
学科分类号
0908 ;
摘要
While marine populations change all the time, sometimes regime shifts involve an entire ecosystem, resulting in crucial and sometimes permanent alterations in the ecosystem trophic web and services. A commonly used method to detect shifts in marine systems is the Sequential t-test Analysis of Regime Shifts (STARS). In this work, we chose to analyse the limits and performance of STARS because of its free open-source software and wide use. For the first time, we tested the STARS algorithm using synthetic time series and autoregressive integrated moving average time series, designed to resemble natural observations. We then applied the information obtained from these tests to investigate the STARS detections on an observed time series, that of Calanus finmarchicus in the North Sea. Our tests indicated that in no experiments did STARS detect 100% of the artificial change points at the exact time of the shift. In most cases, STARS tended to anticipate the shift by a few time units. Overall, we determined STARS to be a good method to detect shifts in observed natural time series, so long as the exact time of the shift is not necessary and the possibility of false positives is taken into account.
引用
收藏
页码:2286 / 2296
页数:11
相关论文
共 56 条
[1]   A Holocene record of ocean productivity and upwelling from the northern California continental slope [J].
Addison, Jason A. ;
Barron, John ;
Finney, Bruce ;
Kusler, Jennifer ;
Bukry, David ;
Heusser, Linda E. ;
Alexander, Clark R. .
QUATERNARY INTERNATIONAL, 2018, 469 :96-108
[2]   Ecological thresholds and regime shifts: approaches to identification [J].
Andersen, Tom ;
Carstensen, Jacob ;
Hernandez-Garcia, Emilio ;
Duarte, Carlos M. .
TRENDS IN ECOLOGY & EVOLUTION, 2009, 24 (01) :49-57
[3]  
[Anonymous], 2000, Change-point Analyzer 2.0 Shareware Program
[4]  
[Anonymous], 1992, SPRINGER SERIES STAT, DOI DOI 10.1007/978-1-4612-4380-9_35
[5]   Synchronous marine pelagic regime shifts in the Northern Hemisphere [J].
Beaugrand, G. ;
Conversi, A. ;
Chiba, S. ;
Edwards, M. ;
Fonda-Umani, S. ;
Greene, C. ;
Mantua, N. ;
Otto, S. A. ;
Reid, P. C. ;
Stachura, M. M. ;
Stemmann, L. ;
Sugisaki, H. .
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2015, 370 (1659) :1-16
[6]   Long-term changes in copepod abundance and diversity in the north-east Atlantic in relation to fluctuations in the hydroclimatic environment [J].
Beaugrand, G .
FISHERIES OCEANOGRAPHY, 2003, 12 (4-5) :270-283
[7]   Marine regime shifts in ocean biogeochemical models: a case study in the Gulf of Alaska [J].
Beaulieu, Claudie ;
Cole, Harriet ;
Henson, Stephanie ;
Yool, Andrew ;
Anderson, Tom ;
de Mora, Lee ;
Buitenhuis, Erik T. ;
Butenschon, Momme ;
Totterdell, Ian J. ;
Allen, J. Icarus .
BIOGEOSCIENCES, 2016, 13 (15) :4533-4553
[8]  
Biggs R., 2012, ENCY THEORETICAL ECO, P609
[9]   Regime-shifts in the southern Benguela shelf and inshore region [J].
Blamey, Laura K. ;
Howard, James A. E. ;
Agenbag, Jacobus ;
Jarre, Astrid .
PROGRESS IN OCEANOGRAPHY, 2012, 106 :80-95
[10]   Reorganization of an arid ecosystem in response to recent climate change [J].
Brown, JH ;
Valone, TJ ;
Curtin, CG .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1997, 94 (18) :9729-9733