Is there a hydrogen bond radius? Evidence from microwave spectroscopy, neutron scattering and X-ray diffraction results

被引:53
作者
Lakshmi, B
Samuelson, AG
Jose, KVJ
Gadre, SR
Arunan, E [1 ]
机构
[1] Indian Inst Sci, Dept Inorgan & Phys Chem, Bangalore 560012, Karnataka, India
[2] Univ Pune, Dept Chem, Pune 411007, Maharashtra, India
关键词
D O I
10.1039/b411815d
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Intermolecular distances in D-H...A hydrogen bonded systems have usually been interpreted in terms of the van der Waals radii of D and A. In this work, X-ray and neutron diffraction data from the Cambridge Crystal Structure Database (CSD) and the electrostatic potential of A, have been used to define hydrogen bond radii for OH, NH and CH groups. For OH, X-ray and neutron diffraction both give comparable results, validating the X-ray data for de. ning a hydrogen bond radius. The hydrogen bond radii determined for C=CH and OH groups from CSD analysis are comparable to those determined from the gas phase rotational spectroscopic data for HCCH and H2O complexes. For NH as a proton donor, gas phase structural data are scarce and a hydrogen bond radius has been determined by using X-ray diffraction data only. For the CH group, the histogram of hydrogen bond distances shows a peak recognizable as a hydrogen bond only if it is acidic such as CCl3H, OCH (aldehydic) or CCH (acetylenic). The hydrogen bond radii for OH, NH and acidic CH groups are 0.60 +/- 0.15, 0.76 +/- 0.15 and 1.10 +/- 0.20 Angstrom, respectively. For C-CH3 and CH2CH3, though a peak in the histogram of distances is not found, the distribution of hydrogen bond angles unambiguously shows that the preferred geometry is linear. It appears that a CH group without any electronegative substituents could have a radius larger than 1.2 Angstrom when involved in hydrogen bonding.
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页码:371 / 377
页数:7
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