Characterization of the complete mitochondrial genome of Oriental reed warbler, Acrocephalus orientalis (Aves: Passeriformes), and a comparative analysis with other Sylviidae species

被引：2

作者：

Kim, Sung Hyun ^{[1
]}

Choi, Soon Kyoo ^{[2
]}

Lee, Seungki ^{[3
]}

机构：

[1] Natl Inst Biol Resources, Strateg Planning Div, Incheon, South Korea

[2] Kangwon Natl Univ, Div Forest Sci, Chunchon, South Korea

[3] Natl Inst Biol Resources, Biol & Genet Resources Assessment Div, Incheon 22689, South Korea

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2020年 / 5卷 / 03期

关键词：

Mitochondrial genome; Passeriformes; Sylviidae; Acrocephalus orientalis;

D O I：

10.1080/23802359.2020.1756946

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

The complete mitochondrial genome of the Oriental reed warbler, Acrocephalus orientalis, which belongs to the family Sylviidae was determined. The complete mitochondrial genome has a length of 16,971 bp and consists of 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and a control region. A. orientalis has a mitochondrial gene arrangement that is typical of vertebrates. Phylogenetic analysis using mitochondrial genomes of 11 related species revealed that A. orientalis is clustered with Acrocephalus scirpaceus and rooted with the other Sylviidae species. This mitochondrial genome provides an important resource for addressing taxonomic issues and studying molecular evolution.

引用

页码：2028 / 2029

页数：2

共 7 条

[1] Near-complete phylogeny and taxonomic revision of the world's babblers (Aves: Passeriformes) [J].

Cai, Tianlong ;

Cibois, Alice ;

Alstrom, Per ;

Moyle, Robert ;

Kennedy, Jonathan ;

Shao, Shimiao ;

Zhang, Ruiying ;

Irestedt, Martin ;

Ericson, Per ;

Gelang, Magnus ;

Qu, Yanhua ;

Lei, Fumin ;

Fjeldsa, Jon .

MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 130 :346-356

[2]

Kumar S, 2016, MOL BIOL EVOL, V33, P1870, DOI [10.1093/molbev/msw054, 10.1093/molbev/msv279]

[3] tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes [J].

Lowe, Todd M. ;

Chan, Patricia P. .

NUCLEIC ACIDS RESEARCH, 2016, 44 (W1) :W54-W57

[4]

Maddison D.R., 2005, MACCLADE 4 ANAL PHYL

[5] Evolutionary genomics in Metazoa: the mitochondrial DNA as a model system [J].

Saccone, C ;

De Giorgi, C ;

Gissi, C ;

Pesole, G ;

Reyes, A .

GENE, 1999, 238 (01) :195-209

[6] Bird mitochondrial gene order: Insight from 3 warbler mitochondrial genomes [J].

Singh, Tiratha Raj ;

Shneor, Ophir ;

Huchon, Dorothee .

MOLECULAR BIOLOGY AND EVOLUTION, 2008, 25 (03) :475-477

[7] Five new mitogenomes of Phylloscopus (Passeriformes, Phylloscopidae): Sequence, structure, and phylogenetic analyses [J].

Sun, Cheng-He ;

Liu, Hong-Yi ;

Lu, Chang-Hu .

INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2020, 146 :638-647

← 1 →