1H-13C/1H-15N Heteronuclear Dipolar Recoupling by R-Symmetry Sequences Under Fast Magic Angle Spinning for Dynamics Analysis of Biological and Organic Solids

被引:81
作者
Hou, Guangjin [1 ,2 ]
Byeon, In-Ja L. [2 ,3 ]
Ahn, Jinwoo [2 ,3 ]
Gronenborn, Angela M. [2 ,3 ]
Polenova, Tatyana [1 ,2 ]
机构
[1] Univ Delaware, Dept Chem & Biochem, Newark, DE 19716 USA
[2] Univ Pittsburgh, Pittsburgh Ctr HIV Prot Interact, Sch Med, Pittsburgh, PA 15261 USA
[3] Univ Pittsburgh, Dept Biol Struct, Sch Med, Pittsburgh, PA 15261 USA
基金
美国国家卫生研究院;
关键词
NUCLEAR-MAGNETIC-RESONANCE; STATE NMR-SPECTROSCOPY; CHEMICAL-SHIFT; DISTANCE MEASUREMENTS; SENSITIVITY ENHANCEMENT; CROSS-POLARIZATION; COAT PROTEIN; ASSIGNMENTS; H-1-NMR; DOMAIN;
D O I
10.1021/ja203771a
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Fast magic angle spinning (MAS) NMR spectroscopy is becoming increasingly important in structural and dynamics studies of biological systems and inorganic materials. Superior spectral resolution due to the efficient averaging of the dipolar couplings can be attained at MAS frequencies of 40 kHz and higher with appropriate decoupling techniques, while proton detection gives rise to significant sensitivity gains, therefore making fast MAS conditions advantageous across the board compared with the conventional slow- and moderate-MAS approaches. At the same time, many of the dipolar recoupling approaches that currently constitute the basis for structural and dynamics studies of solid materials and that are designed for MAS frequencies of 20 kHz and below, fail above 30 kHz. In this report, we present an approach for H-1-C-13/H-1-N-15 heteronuclear dipolar recoupling under fast MAS conditions using R-type symmetry sequences, which is suitable even for fully protonated systems. A series of rotor-synchronized R-type symmetry pulse schemes are explored for the determination of structure and dynamics in biological and organic systems. The investigations of the performance of the various RNnv-symmetry sequences at the MAS frequency of 40 kHz experimentally and by numerical simulations on [U-C-13,N-15]-alanine and [U-C-13,N-15]-N-acetyl-valine, revealed excellent performance for sequences with high symmetry number ratio (N/2n > 2.5). Further applications of this approach are presented for two proteins, sparsely C-13/uniformly(15)N-enriched CAP-Gly domain of dynactin and U-C-13,N-15-Tyr enriched C-terminal domain of HIV-1 CA protein. Two-dimensional (2D) and 3D R16(3)(2)-based DIPSHIFT experiments carried out at the MAS frequency of 40 kHz, yielded site-specific H-1-C-13/H-1-N-15 heteronuclear dipolar coupling constants for CAP-Gly and CTD CA, reporting on the dynamic behavior of these proteins on time scales of nano- to microseconds. The R-symmetry-based dipolar recoupling under fast MAS is expected to find numerous applications in studies of protein assemblies and organic solids by MAS NMR spectroscopy.
引用
收藏
页码:18646 / 18655
页数:10
相关论文
共 83 条
  • [1] REMOVAL OF DIPOLAR BROADENING OF NUCLEAR MAGNETIC RESONANCE SPECTRA OF SOLIDS BY SPECIMEN ROTATION
    ANDREW, ER
    BRADBURY, A
    EADES, RG
    [J]. NATURE, 1959, 183 (4678) : 1802 - 1803
  • [2] Probing membrane protein orientation and structure using fast magic-angle-spinning solid-state NMR
    Andronesi, OC
    Pfeifer, JR
    Al-Momani, L
    Özdirekcan, S
    Rijkers, DTS
    Angerstein, B
    Luca, S
    Koert, U
    Killian, JA
    Baldus, M
    [J]. JOURNAL OF BIOMOLECULAR NMR, 2004, 30 (03) : 253 - 265
  • [3] SIMPSON: A general simulation program for solid-state NMR spectroscopy
    Bak, M
    Rasmussen, JT
    Nielsen, NC
    [J]. JOURNAL OF MAGNETIC RESONANCE, 2000, 147 (02) : 296 - 330
  • [4] Baldus M, 1998, MOL PHYS, V95, P1197, DOI 10.1080/00268979809483251
  • [5] Radio frequency-driven recoupling at high magic-angle spinning frequencies: Homonuclear recoupling sans heteronuclear decoupling
    Bayro, Marvin J.
    Ramachandran, Ramesh
    Caporini, Marc A.
    Eddy, Matthew T.
    Griffin, Robert G.
    [J]. JOURNAL OF CHEMICAL PHYSICS, 2008, 128 (05)
  • [6] Quantitative conformational measurements in solid state NMR by constant-time homonuclear dipolar recoupling
    Bennett, AE
    Weliky, DP
    Tycko, R
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1998, 120 (19) : 4897 - 4898
  • [7] CHEMICAL-SHIFT CORRELATION SPECTROSCOPY IN ROTATING SOLIDS - RADIO FREQUENCY-DRIVEN DIPOLAR RECOUPLING AND LONGITUDINAL EXCHANGE
    BENNETT, AE
    OK, JH
    GRIFFIN, RG
    VEGA, S
    [J]. JOURNAL OF CHEMICAL PHYSICS, 1992, 96 (11) : 8624 - 8627
  • [8] Head-to-tail dimers and interdomain flexibility revealed by the crystal structure of HIV-1 capsid protein (p24) complexed with a monoclonal antibody Fab
    Berthet-Colominas, C
    Monaco, S
    Novelli, A
    Sibaï, G
    Mallet, F
    Cusack, S
    [J]. EMBO JOURNAL, 1999, 18 (05) : 1124 - 1136
  • [9] Solid-state NMR heteronuclear dipolar recoupling using off-resonance symmetry-based pulse sequences
    Bjerring, M
    Nielsen, NC
    [J]. CHEMICAL PHYSICS LETTERS, 2003, 370 (3-4) : 496 - 503
  • [10] Symmetry principles in the nuclear magnetic resonance of spinning solids: Heteronuclear recoupling by generalized Hartmann-Hahn sequences
    Brinkmann, A
    Levitt, MH
    [J]. JOURNAL OF CHEMICAL PHYSICS, 2001, 115 (01) : 357 - 384