The Discovery of 5-Formylcytosine in Embryonic Stem Cell DNA

被引:380
|
作者
Pfaffeneder, Toni [2 ]
Hackner, Benjamin [2 ]
Truss, Matthias [1 ]
Muenzel, Martin [2 ]
Mueller, Markus [2 ]
Deiml, Christian A. [2 ]
Hagemeier, Christian [1 ]
Carell, Thomas [2 ]
机构
[1] Charite Univ Klinikum, Otto Heubner Ctr Kinder & Jugendmed, Klin Allgemeine Padiat, Lab Padiat Mol Biol, D-10098 Berlin, Germany
[2] Univ Munich, Fak Chem & Pharm, CIPSM, D-81377 Munich, Germany
关键词
active demethylation; epigenetics; 5-formylcytosine; 5-hydroxymethylcytosine; mass spectrometry; 5-HYDROXYMETHYLCYTOSINE; METHYLATION; 5-METHYLCYTOSINE; GENOME; TET1; DEMETHYLATION; HYDROXYMETHYLCYTOSINE; QUANTIFICATION; CONVERSION; CATALYSIS;
D O I
10.1002/anie.201103899
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Touching base: Sophisticated mass spectrometry has shown that 5-formylcytosine is a constituent of mammalian embryonic stem cell DNA. This base is likely produced from methylcytosine via hydroxymethylcytosine (see scheme), and it may serve as an intermediate in the long searched for pathway of active DNA demethylation. Copyright © 2011 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.
引用
收藏
页码:7008 / 7012
页数:5
相关论文
共 50 条
  • [21] Quantitative sequencing of 5-formylcytosine in DNA at single-base resolution
    Booth, Michael J.
    Marsico, Giovanni
    Bachman, Martin
    Beraldi, Dario
    Balasubramanian, Shankar
    NATURE CHEMISTRY, 2014, 6 (05) : 435 - 440
  • [22] Two new DNA bases discovered: 5-formylcytosine and 5-carboxylcytosine
    不详
    EPIGENOMICS, 2011, 3 (05) : 534 - 534
  • [23] Dynamic deformylation of 5-formylcytosine and decarboxylation of 5-carboxylcytosine during differentiation of mouse embryonic stem cells into mouse neurons
    Yang Feng
    YangQing Tian
    YongQiang Zhao
    ShengJun Chen
    BiFeng Yuan
    Chinese Chemical Letters, 2024, 35 (11) : 305 - 310
  • [24] Dynamic deformylation of 5-formylcytosine and decarboxylation of 5-carboxylcytosine during differentiation of mouse embryonic stem cells into mouse neurons
    Feng, Yang
    Tian, Yang-Qing
    Zhao, Yong-Qiang
    Chen, Sheng-Jun
    Yuan, Bi-Feng
    CHINESE CHEMICAL LETTERS, 2024, 35 (11)
  • [25] Divergent Mechanisms for Enzymatic Excision of 5-Formylcytosine and 5-Carboxylcytosine from DNA
    Maiti, Atanu
    Michelson, Anna Zhachkina
    Armwood, Cherece J.
    Lee, Jeehiun K.
    Drohat, Alexander C.
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2013, 135 (42) : 15813 - 15822
  • [26] Chemical Method to Sequence 5-Formylcytosine on RNA
    Li, Ang
    Sun, Xuemeng
    Arguello, A. Emilia
    Kleiner, Ralph E.
    ACS CHEMICAL BIOLOGY, 2022, 17 (03) : 503 - 508
  • [27] Mutagenicity of 5-formylcytosine, an oxidation product of 5-methylcytosine, in DNA in mammalian cells
    Kamiya, H
    Tsuchiya, H
    Karino, N
    Ueno, Y
    Matsuda, A
    Harashima, H
    JOURNAL OF BIOCHEMISTRY, 2002, 132 (04): : 551 - 555
  • [28] 5-Formylcytosine and 5-Carboxylcytosine Significantly Reduce the Catalytic Activity of Hhal DNA Methyltransferase
    Hong, Tingting
    Wu, Fan
    Fu, Boshi
    Yuan, Yushu
    Xu, Jinglei
    Wang, Tianlu
    Zhou, Xiang
    CHINESE JOURNAL OF CHEMISTRY, 2017, 35 (06) : 853 - 856
  • [29] Bisulfite-free and quantitative detection of 5-formylcytosine in DNA through qPCR
    Liu, Jizhou
    Yang, Wei
    Zhang, Xiong
    Wang, Yafen
    Zhou, Xiang
    CHEMICAL COMMUNICATIONS, 2021, 57 (100) : 13796 - 13798
  • [30] Addendum: Quantitative sequencing of 5-formylcytosine in DNA at single-base resolution
    Michael J. Booth
    Giovanni Marsico
    Martin Bachman
    Dario Beraldi
    Shankar Balasubramanian
    Nature Chemistry, 2014, 6 : 553 - 553