Recommendations for Reporting Metabolite Data

被引:255
作者
Fernie, Alisdair R. [1 ]
Aharoni, Asaph [2 ]
Willmitzer, Lothar [1 ]
Stitt, Mark [1 ]
Tohge, Takayuki [1 ]
Kopka, Joachim [1 ]
Carroll, Adam J. [3 ]
Saito, Kazuki [4 ,5 ]
Fraser, Paul D. [6 ]
DeLuca, Vincenzo [7 ]
机构
[1] Max Planck Inst Mol Pflanzenphysiol, D-14476 Golm, Germany
[2] Weizmann Inst Sci, Dept Plant Sci, IL-76100 Rehovot, Israel
[3] Australian Natl Univ, Plant Energy Biol Australian Res Council, Ctr Excellence, Res Sch Biol, Canberra, ACT 0200, Australia
[4] RIKEN Plant Sci Ctr, Kanagawa 2300045, Japan
[5] Chiba Univ, Grad Sch Pharmaceut Sci, Chiba 2638522, Japan
[6] Univ London, Sch Biol Sci, Egham TW20 0EX, Surrey, England
[7] Brock Univ, Dept Biol, St Catharines, ON L2S 3A1, Canada
基金
英国生物技术与生命科学研究理事会;
关键词
ARABIDOPSIS-THALIANA; LIQUID-CHROMATOGRAPHY; PLANT METABOLOMICS; MASS-SPECTROMETRY; FUNCTIONAL GENOMICS; REVEALS; ANNOTATION; IDENTIFICATION; PHYTOCHEMISTRY; BIOLOGY;
D O I
10.1105/tpc.111.086272
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
引用
收藏
页码:2477 / 2482
页数:6
相关论文
共 52 条
[1]  
Aharoni Asaph, 2002, OMICS A Journal of Integrative Biology, V6, P217, DOI 10.1089/15362310260256882
[2]  
ap Rees T, 1977, Biochim Biophys Acta, V461, P274, DOI 10.1016/0005-2728(77)90177-3
[3]  
Ap Rees T., 1994, Plant Cell and Environment, V17, P587, DOI 10.1111/j.1365-3040.1994.tb00151.x
[4]   Use of reverse-phase liquid chromatography, linked to tandem mass spectrometry, to profile the Calvin cycle and other metabolic intermediates in Arabidopsis rosettes at different carbon dioxide concentrations [J].
Arrivault, Stephanie ;
Guenther, Manuela ;
Ivakov, Alexander ;
Feil, Regina ;
Vosloh, Daniel ;
van Dongen, Joost T. ;
Sulpice, Ronan ;
Stitt, Mark .
PLANT JOURNAL, 2009, 59 (05) :824-839
[5]   THE RELATIONSHIP BETWEEN STEADY-STATE GAS-EXCHANGE OF BEAN-LEAVES AND THE LEVELS OF CARBON-REDUCTION-CYCLE INTERMEDIATES [J].
BADGER, MR ;
SHARKEY, TD ;
VONCAEMMERER, S .
PLANTA, 1984, 160 (04) :305-313
[6]   Genome-scale proteomics reveals Arabidopsis thaliana gene models and proteome dynamics [J].
Baerenfaller, Katja ;
Grossmann, Jonas ;
Grobei, Monica A. ;
Hull, Roger ;
Hirsch-Hoffmann, Matthias ;
Yalovsky, Shaul ;
Zimmermann, Philip ;
Grossniklaus, Ueli ;
Gruissem, Wilhelm ;
Baginsky, Sacha .
SCIENCE, 2008, 320 (5878) :938-941
[7]   PlantMetabolomics.org: A Web Portal for Plant Metabolomics Experiments [J].
Bais, Preeti ;
Moon, Stephanie M. ;
He, Kun ;
Leitao, Ricardo ;
Dreher, Kate ;
Walk, Tom ;
Sucaet, Yves ;
Barkan, Lenore ;
Wohlgemuth, Gert ;
Roth, Mary R. ;
Wurtele, Eve Syrkin ;
Dixon, Philip ;
Fiehn, Oliver ;
Lange, B. Markus ;
Shulaev, Vladimir ;
Sumner, Lloyd W. ;
Welti, Ruth ;
Nikolau, Basil J. ;
Rhee, Seung Y. ;
Dickerson, Julie A. .
PLANT PHYSIOLOGY, 2010, 152 (04) :1807-1816
[8]   Metabolome analysis:: the potential of in vivo labeling with stable isotopes for metabolite profiling [J].
Birkemeyer, C ;
Luedemann, A ;
Wagner, C ;
Erban, A ;
Kopka, J .
TRENDS IN BIOTECHNOLOGY, 2005, 23 (01) :28-33
[9]   The MetabolomeExpress Project: enabling web-based processing, analysis and transparent dissemination of GC/MS metabolomics datasets [J].
Carroll, Adam J. ;
Badger, Murray R. ;
Millar, A. Harvey .
BMC BIOINFORMATICS, 2010, 11
[10]   The secondary metabolism of Arabidopsis thaliana:: growing like a weed [J].
D'Auria, JC ;
Gershenzon, J .
CURRENT OPINION IN PLANT BIOLOGY, 2005, 8 (03) :308-316