DNA barcodes of fish of the Scotia Sea, Antarctica indicate priority groups for taxonomic and systematics focus

被引:72
作者
Rock, J. [1 ]
Costa, F. O. [1 ]
Walker, D. I. [1 ]
North, A. W. [1 ]
Hutchinson, W. F. [2 ]
Carvalho, G. R. [1 ]
机构
[1] Univ Wales, Sch Biol Sci, Mol Ecol & Fisheries Genet Lab, Bangor LL57 2UW, Gwynedd, Wales
[2] Univ Hull, Dept Biol Sci, Kingston Upon Hull HU6 7RX, N Humberside, England
基金
英国自然环境研究理事会;
关键词
COI; cyt b; Liparidae; myctophidae; Notothenioidei; Zoarcidae;
D O I
10.1017/S0954102008001120
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
We analysed cytochrome oxidase I (COI) barcodes for 35 putative fish species collected in the Scotia Sea, and compared the resultant molecular data with field-based morphological identifications, and additional sequence data obtained from GenBank and the Barcode of Life Data System (BOLD). There was high congruence between morphological and molecular classification, and COI provided effective species-level discrimination for nearly all putative species. No effect of geographic sampling was observed for COI sequence variation. For two families, including the Liparidae and Zoarcidae, for which morphological field identification was unable to resolve taxonomy, DNA barcoding revealed significant species-level divergence. However, the dataset lacked sufficient sensitivity for resolving species within the Bathydraco and Artedidraco genera. Analysis of cytochrome b for these two genera also failed to resolve taxonomic identity. The data are discussed in relation to emergent priorities for additional taxonomic studies. We emphasize the utility of DNA barcoding in providing a valuable taxonomic framework for fundamental population studies through assigning life history stages or other morphologically ambiguous samples to parental species.
引用
收藏
页码:253 / 262
页数:10
相关论文
共 39 条
[1]  
ANDERSON M E, 1988, Antarctic Research Series, V47, P59
[2]  
Andriashev Anatole P., 1998, Contributions in Science (Los Angeles), V470, P1
[3]  
ANDRIASHEV AP, 1986, THESES ZOOLOGICAE, V7, P204
[4]   Mitochondrial phylogeny of notothenioids: A molecular approach to antarctic fish evolution and biogeography [J].
Bargelloni, L ;
Marcato, S ;
Zane, L ;
Patarnello, T .
SYSTEMATIC BIOLOGY, 2000, 49 (01) :114-129
[5]   Molecular zoogeography of Antarctic euphausiids and notothenioids: from species phylogenies to intraspecific patterns of genetic variation [J].
Bargelloni, L ;
Zane, L ;
Derome, N ;
Lecointre, G ;
Patarnello, T .
ANTARCTIC SCIENCE, 2000, 12 (03) :259-268
[6]   Population size does not influence mitochondrial genetic diversity in animals [J].
Bazin, E ;
Glémin, S ;
Galtier, N .
SCIENCE, 2006, 312 (5773) :570-572
[7]   Molecular evidence for cryptic species among the Antarctic fish Trematomus bernacchii and Trematomus hansoni [J].
Bernardi, G ;
Goswami, U .
ANTARCTIC SCIENCE, 1997, 9 (04) :381-385
[8]   The promise of a DNA taxonomy [J].
Blaxter, ML .
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2004, 359 (1444) :669-679
[9]   Climate change and the marine ecosystem of the western Antarctic Peninsula [J].
Clarke, Andrew ;
Murphy, Eugene J. ;
Meredith, Michael P. ;
King, John C. ;
Peck, Lloyd S. ;
Barnes, David K. A. ;
Smith, Raymond C. .
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2007, 362 (1477) :149-166
[10]  
Costa FO, 2007, GENOMICS SOC POLICY, V3, P29, DOI DOI 10.1186/1746-5354-3-2-29