Gitools: Analysis and Visualisation of Genomic Data Using Interactive Heat-Maps

被引：242

作者：

Perez-Llamas, Christian ^{[1
]}

Lopez-Bigas, Nuria ^{[1
]}

机构：

[1] Univ Pompeu Fabra, Dept Expt & Hlth Sci, Res Unit Biomed Informat, Barcelona, Spain

来源：

PLOS ONE | 2011年 / 6卷 / 05期

关键词：

GENE SET ENRICHMENT; ONTOLOGY TOOL; EXPRESSION; PLATFORM; SUITE;

D O I：

10.1371/journal.pone.0019541

中图分类号：

O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];

学科分类号：

07 ; 0710 ; 09 ;

摘要：

Intuitive visualization of data and results is very important in genomics, especially when many conditions are to be analyzed and compared. Heat-maps have proven very useful for the representation of biological data. Here we present Gitools (http://www.gitools.org), an open-source tool to perform analyses and visualize data and results as interactive heat-maps. Gitools contains data import systems from several sources (i.e. IntOGen, Biomart, KEGG, Gene Ontology), which facilitate the integration of novel data with previous knowledge.

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