Protein aggregates nucleate ice: the example of apoferritin

被引:33
作者
Cascajo-Castresana, Maria [1 ,2 ,3 ]
David, Robert O. [3 ,4 ]
Iriarte-Alonso, Maiara A. [2 ]
Bittner, Alexander M. [2 ,5 ]
Marcolli, Claudia [3 ]
机构
[1] TECNALIA, Div Salud, Parque Tecnol,Paseo Mikeletegi 2, Donostia San Sebastian 20009, Spain
[2] CIC NanoGUNE, Tolosa Hiribidea 76, Donostia San Sebastian 20018, Spain
[3] Swiss Fed Inst Technol, Inst Atmospher & Climate Sci, Dept Environm Syst Sci, CH-8092 Zurich, Switzerland
[4] Univ Oslo, Dept Geosci, N-0315 Oslo, Norway
[5] Basque Fdn Sci, Ikerbasque, Ma Diaz Haro 3, Bilbao 48013, Spain
基金
瑞士国家科学基金会;
关键词
HORSE SPLEEN APOFERRITIN; BIOLOGICAL AEROSOL-PARTICLES; SEA SPRAY AEROSOL; PSEUDOMONAS-SYRINGAE; ELECTRON-MICROSCOPY; AQUEOUS-SOLUTIONS; ACTIVE BACTERIA; WATER DROPLETS; FUNGAL SPORES; FROST INJURY;
D O I
10.5194/acp-20-3291-2020
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
Biological material has gained increasing attention recently as a source of ice-nucleating particles that may account for cloud glaciation at moderate supercooling. While the ice-nucleation (IN) ability of some bacteria can be related to membrane-bound proteins with epitaxial fit to ice, little is known about the IN-active entities present in biological material in general. To elucidate the potential of proteins and viruses to contribute to the IN activity of biological material, we performed bulk freezing experiments with the newly developed drop freezing assay DRoplet Ice Nuclei Counter Zurich (DRINCZ), which allows the simultaneous cooling of 96 sample aliquots in a chilled ethanol bath. We performed a screening of common proteins, namely the iron storage protein ferritin and its iron-free counterpart apoferritin, the milk protein casein, the egg protein ovalbumin, two hydrophobins, and a yeast ice-binding protein, all of which revealed IN activity with active site densities > 0.1 mg(-1) at -10 degrees C. The tobacco mosaic virus, a plant virus based on helically assembled proteins, also proved to be IN active with active site densities increasing from 100 mg(-1) at -14 degrees C to 10 000 mg(-1) at -20 degrees C. Among the screened proteins, the IN activity of horse spleen ferritin and apoferritin, which form cages of 24 co-assembled protein subunits, proved to be outstanding with active site densities > 10 mg(-1) at -5 degrees C. Investigation of the pH dependence and heat resistance of the apoferritin sample confirmed the proteinaceous nature of its IN-active entities but excluded the correctly folded cage monomer as the IN-active species. A dilution series of apoferritin in water revealed two distinct freezing ranges, an upper one from -4 to -11 degrees C and a lower one from -11 to -21 degrees C. Dynamic light scattering measurements related the upper freezing range to ice-nucleating sites residing on aggregates and the lower freezing range to sites located on misfolded cage monomers or oligomers. The sites proved to persist during several freeze-thaw cycles performed with the same sample aliquots. Based on these results, IN activity seems to be a common feature of diverse proteins, irrespective of their function, but arising only rarely, most probably through defective folding or aggregation to structures that are IN active.
引用
收藏
页码:3291 / 3315
页数:25
相关论文
共 176 条
[51]   Ice nucleation properties of rust and bunt fungal spores and their transport to high altitudes, where they can cause heterogeneous freezing [J].
Haga, D. I. ;
Iannone, R. ;
Wheeler, M. J. ;
Mason, R. ;
Polishchuk, E. A. ;
Fetch, T., Jr. ;
van der Kamp, B. J. ;
McKendry, I. G. ;
Bertram, A. K. .
JOURNAL OF GEOPHYSICAL RESEARCH-ATMOSPHERES, 2013, 118 (13) :7260-7272
[52]   PRODUCTION OF SECONDARY ICE PARTICLES DURING RIMING PROCESS [J].
HALLETT, J ;
MOSSOP, SC .
NATURE, 1974, 249 (5452) :26-28
[53]   Comparison of the three-dimensional structures of recombinant human H and horse L ferritins at high resolution [J].
Hempstead, PD ;
Yewdall, SJ ;
Fernie, AR ;
Lawson, DM ;
Artymiuk, PJ ;
Rice, DW ;
Ford, GC ;
Harrison, PM .
JOURNAL OF MOLECULAR BIOLOGY, 1997, 268 (02) :424-448
[54]   Measurement of Ice Nucleation-Active Bacteria on Plants and in Precipitation by Quantitative PCR [J].
Hill, Thomas C. J. ;
Moffett, Bruce F. ;
DeMott, Paul J. ;
Georgakopoulos, Dimitrios G. ;
Stump, William L. ;
Franc, Gary D. .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2014, 80 (04) :1256-1267
[55]   Sources of organic ice nucleating particles in soils [J].
Hill, Tom C. J. ;
DeMott, Paul J. ;
Tobo, Yutaka ;
Froehlich-Nowoisky, Janine ;
Moffett, Bruce F. ;
Franc, Gary D. ;
Kreidenweis, Sonia M. .
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2016, 16 (11) :7195-7211
[56]   Bacteria in the leaf ecosystem with emphasis on Pseudomonas syringae -: a pathogen, ice nucleus, and epiphyte [J].
Hirano, SS ;
Upper, CD .
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS, 2000, 64 (03) :624-+
[57]   Ice nucleation by cellulose and its potential contribution to ice formation in clouds [J].
Hiranuma, N. ;
Moehler, O. ;
Yamashita, K. ;
Tajiri, T. ;
Saito, A. ;
Kiselev, A. ;
Hoffmann, N. ;
Hoose, C. ;
Jantsch, E. ;
Koop, T. ;
Murakami, M. .
NATURE GEOSCIENCE, 2015, 8 (04) :273-277
[58]   A comprehensive laboratory study on the immersion freezing behavior of illite NX particles: a comparison of 17 ice nucleation measurement techniques [J].
Hiranuma, N. ;
Augustin-Bauditz, S. ;
Bingemer, H. ;
Budke, C. ;
Curtius, J. ;
Danielczok, A. ;
Diehl, K. ;
Dreischmeier, K. ;
Ebert, M. ;
Frank, F. ;
Hoffmann, N. ;
Kandler, K. ;
Kiselev, A. ;
Koop, T. ;
Leisner, T. ;
Moehler, O. ;
Nillius, B. ;
Peckhaus, A. ;
Rose, D. ;
Weinbruch, S. ;
Wex, H. ;
Boose, Y. ;
DeMott, P. J. ;
Hader, J. D. ;
Hill, T. C. J. ;
Kanji, Z. A. ;
Kulkarni, G. ;
Levin, E. J. T. ;
McCluskey, C. S. ;
Murakami, M. ;
Murray, B. J. ;
Niedermeier, D. ;
Petters, M. D. ;
O'Sullivan, D. ;
Saito, A. ;
Schill, G. P. ;
Tajiri, T. ;
Tolbert, M. A. ;
Welti, A. ;
Whale, T. F. ;
Wright, T. P. ;
Yamashita, K. .
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2015, 15 (05) :2489-2518
[59]   Heterogeneous ice nucleation on atmospheric aerosols: a review of results from laboratory experiments [J].
Hoose, C. ;
Moehler, O. .
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2012, 12 (20) :9817-9854
[60]   Ice formation on kaolinite: Lattice match or amphoterism? [J].
Hu, Xiao Liang ;
Michaelides, Angelos .
SURFACE SCIENCE, 2007, 601 (23) :5378-5381