Endogenous viruses: insights into viral evolution and impact on host biology

被引:510
作者
Feschotte, Cedric [1 ]
Gilbert, Clement [2 ]
机构
[1] Univ Texas Arlington, Dept Biol, Arlington, TX 76016 USA
[2] Univ Poitiers, UMR CNRS Ecol & Biol Interact,Equipe Ecol Evolut, Poitiers, France
基金
美国国家卫生研究院;
关键词
EMBRYONIC STEM-CELLS; GENE REGULATORY NETWORKS; RETROVIRAL ENVELOPE GENE; STRANDED-DNA VIRUSES; TRANSPOSABLE ELEMENTS; STRUCTURAL VARIATION; POSITIVE SELECTION; MAMMALIAN GENOMES; RNA VIRUSES; INFECTIOUS PROGENITOR;
D O I
10.1038/nrg3199
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Recent studies have uncovered myriad viral sequences that are integrated or 'endogenized' in the genomes of various eukaryotes. Surprisingly, it appears that not just retroviruses but almost all types of viruses can become endogenous. We review how these genomic 'fossils' offer fresh insights into the origin, evolutionary dynamics and structural evolution of viruses, which are giving rise to the burgeoning field of palaeovirology. We also examine the multitude of ways through which endogenous viruses have influenced, for better or worse, the biology of their hosts. We argue that the conflict between hosts and viruses has led to the invention and diversification of molecular arsenals, which, in turn, promote the cellular co- option of endogenous viruses.
引用
收藏
页码:283 / U88
页数:14
相关论文
共 150 条
[1]   The latent human herpesvirus-6A genome specifically integrates in telomeres of human chromosomes in vivo and in vitro [J].
Arbuckle, Jesse H. ;
Medveczky, Maria M. ;
Luka, Janos ;
Hadley, Stephen H. ;
Luegmayr, Andrea ;
Ablashi, Dharam ;
Lund, Troy C. ;
Tolar, Jakub ;
De Meirleir, Kenny ;
Montoya, Jose G. ;
Komaroff, Anthony L. ;
Ambros, Peter F. ;
Medveczky, Peter G. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2010, 107 (12) :5563-5568
[2]   Coevolution of endogenous Betaretroviruses of sheep and their host [J].
Arnaud, F. ;
Varela, M. ;
Spencer, T. E. ;
Palmarini, M. .
CELLULAR AND MOLECULAR LIFE SCIENCES, 2008, 65 (21) :3422-3432
[3]   A paradigm for virus-host coevolution: Sequential counter-adaptations between endogenous and exogenous retroviruses [J].
Arnaud, Frederick ;
Caporale, Marco ;
Varela, Mariana ;
Biek, Roman ;
Chessa, Bernardo ;
Alberti, Alberto ;
Golder, Matthew ;
Mura, Manuela ;
Zhang, Ya-ping ;
Yu, Li ;
Pereira, Filipe ;
DeMartini, James C. ;
Leymaster, Kreg ;
Spencer, Thomas E. ;
Palmarini, Massimo .
PLOS PATHOGENS, 2007, 3 (11) :1716-1729
[4]   Analysis of multiple copies of geminiviral DNA in the genome of four closely related Nicotiana species suggest a unique integration event [J].
Ashby, MK ;
Warry, A ;
Bejarano, ER ;
Khashoggi, A ;
Burrell, M ;
Lichtenstein, CP .
PLANT MOLECULAR BIOLOGY, 1997, 35 (03) :313-321
[5]   Retroelements and the human genome: New perspectives on an old relation [J].
Bannert, N ;
Kurth, R .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 :14572-14579
[6]   LINE-1 Elements in Structural Variation and Disease [J].
Beck, Christine R. ;
Luis Garcia-Perez, Jose ;
Badge, Richard M. ;
Moran, John V. .
ANNUAL REVIEW OF GENOMICS AND HUMAN GENETICS, VOL 12, 2011, 12 :187-215
[7]   Integration of multiple repeats of geminiviral DNA into the nuclear genome of tobacco during evolution [J].
Bejarano, ER ;
Khashoggi, A ;
Witty, M ;
Lichtenstein, C .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1996, 93 (02) :759-764
[8]   Sequences from Ancestral Single-Stranded DNA Viruses in Vertebrate Genomes: the Parvoviridae and Circoviridae Are More than 40 to 50 Million Years Old [J].
Belyi, Vladimir A. ;
Levine, Arnold J. ;
Skalka, Anna Marie .
JOURNAL OF VIROLOGY, 2010, 84 (23) :12458-12462
[9]   Unexpected Inheritance: Multiple Integrations of Ancient Bornavirus and Ebolavirus/Marburgvirus Sequences in Vertebrate Genomes [J].
Belyi, Vladimir A. ;
Levine, Arnold J. ;
Skalka, Anna Marie .
PLOS PATHOGENS, 2010, 6 (07) :1-13
[10]   The Origins and Evolution of the p53 Family of Genes [J].
Belyi, Vladimir A. ;
Ak, Prashanth ;
Markert, Elke ;
Wang, Haijian ;
Hu, Wenwei ;
Puzio-Kuter, Anna ;
Levine, Arnold J. .
COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY, 2010, 2 (06) :a001198