The Membrane Environment Can Promote or Suppress Bistability in Cell Signaling Networks

被引:33
作者
Abel, Steven M. [1 ]
Roose, Jeroen P. [5 ]
Groves, Jay T. [6 ,7 ,8 ,9 ]
Weiss, Arthur [10 ]
Chakraborty, Arup K. [1 ,2 ,3 ,4 ]
机构
[1] MIT, Dept Chem Engn, Cambridge, MA 02139 USA
[2] MIT, Dept Chem, Cambridge, MA 02139 USA
[3] MIT, Dept Biol Engn, Cambridge, MA 02139 USA
[4] Ragon Inst MGH MIT & Harvard, Charlestown, MA 02129 USA
[5] Univ Calif San Francisco, Dept Anat, San Francisco, CA 94143 USA
[6] Univ Calif Berkeley, Howard Hughes Med Inst, Dept Chem, Berkeley, CA 94720 USA
[7] Univ Calif Berkeley, Biophys Grad Grp, Berkeley, CA 94720 USA
[8] Univ Calif Berkeley, Lawrence Berkeley Natl Lab, Phys Biosci Div, Berkeley, CA 94720 USA
[9] Univ Calif Berkeley, Lawrence Berkeley Natl Lab, Div Mat Sci, Berkeley, CA 94720 USA
[10] Univ Calif San Francisco, Dept Med, Div Rheumatol, Howard Hughes Med Inst, San Francisco, CA 94143 USA
关键词
PROTEIN-KINASE; MULTISITE PHOSPHORYLATION; DIFFUSION; TRANSDUCTION; ACTIVATION; SIMULATION; MECHANISM; KINETICS; FEEDBACK; PATHWAY;
D O I
10.1021/jp2102385
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Many key biochemical reactions that mediate signal transduction in cells occur at the cell membrane, yet how the two-dimensional membrane environment influences the collective behavior of signaling networks is poorly understood. We study models of two topologically different signaling pathways that exhibit bistability, examining the effects of reduced protein mobility and increased concentration at the membrane, as well as effects due to differences in spatiotemporal correlations between the membrane environment and three-dimensional cytoplasm. The two model networks represent the distributive enzymatic modification of a protein at multiple sites and the positive feedback-mediated activation of a protein. In both cases, we find that confining proteins to a membrane-like environment can markedly alter the emergent dynamics. For the distributive protein modification network, increased concentration promotes bistability through enhanced protein protein binding, while lower mobility and membrane-enhanced spatiotemporal correlations suppress bistability. For the positive feedback-mediated activation network, confinement to a membrane environment enhances protein activation, which can induce bistability or stabilize a monostable, active state. Importantly, the influence of the membrane environment on signaling dynamics can be qualitatively different for signaling modules with different network topologies.
引用
收藏
页码:3630 / 3640
页数:11
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