Key Insights and Research Prospects at the Dawn of the Population Genomics Era for Verticillium dahliae

被引:31
作者
Chen, Jie-Yin [1 ]
Klosterman, Steven J. [2 ]
Hu, Xiao-Ping [3 ]
Dai, Xiao-Feng [1 ]
Subbarao, Krishna V. [4 ]
机构
[1] Chinese Acad Agr Sci, Inst Plant Protect, State Key Lab Biol Plant Dis & Insect Pests, Beijing 100193, Peoples R China
[2] ARS, USDA, Salinas, CA 93905 USA
[3] Northwest A&F Univ, Coll Plant Protect, State Key Lab Crop Stress Biol Arid Areas, Yangling 712100, Shaanxi, Peoples R China
[4] Univ Calif Davis, Dept Plant Pathol, Davis, CA 93905 USA
来源
ANNUAL REVIEW OF PHYTOPATHOLOGY, VOL 59, 2021 | 2021年 / 59卷
关键词
Verticillium dahliae; biological characteristics; population structure; asexual; sexual; population genomics; VEGETATIVE COMPATIBILITY GROUPS; PROTEIN-TAGGED ISOLATE; RACE; MOLECULAR CHARACTERIZATION; NONDEFOLIATING PATHOTYPES; LENGTH POLYMORPHISM; ETHYLENE PRODUCTION; CLONAL EXPANSION; ALBO-ATRUM; HOST-RANGE;
D O I
10.1146/annurev-phyto-020620-121925
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
The genomics era has ushered in exciting possibilities to examine the genetic bases that undergird the characteristic features of Verticillium dahliae and other plant pathogens. In this review, we provide historical perspectives on some of the salient biological characteristics of V. dahliae, including its morphology, microsclerotia formation, host range, disease symptoms, vascular niche, reproduction, and population structure. The kaleidoscopic population structure of this pathogen is summarized, including different races of the pathogen, defoliating and nondefoliating phenotypes, vegetative compatibility groupings, and clonal populations. Where possible, we place the characteristic differences in the context of comparative and functional genomics analyses that have offered insights into population divergence within V. dahliae and the related species.
引用
收藏
页码:31 / 51
页数:21
相关论文
共 136 条
[1]  
ALEXANDER LJ, 1962, PHYTOPATHOLOGY, V52, P998
[2]   A population genomics insight into the Mediterranean origins of wine yeast domestication [J].
Almeida, Pedro ;
Barbosa, Raquel ;
Zalar, Polona ;
Imanishi, Yumi ;
Shimizu, Kiminori ;
Turchetti, Benedetta ;
Legras, Jean-Luc ;
Serra, Marta ;
Dequin, Sylvie ;
Couloux, Arnaud ;
Guy, Julie ;
Bensasson, Douda ;
Goncalves, Paula ;
Sampaio, Jose Paulo .
MOLECULAR ECOLOGY, 2015, 24 (21) :5412-5427
[3]  
Atallah Z K., 2009, Mol. Ecol. Resour, V9, P1460
[4]  
Atallah ZK, 2012, PHYTOPATHOLOGY, V102, P1071, DOI [10.1094/PHYTO-04-12-0067-R, 10.1094/PHYTO-04-12-0]
[5]   Analysis of Verticillium dahliae Suggests a Lack of Correlation Between Genotypic Diversity and Virulence Phenotypes [J].
Atallah, Zahi K. ;
Maruthachalam, Karunakaran ;
Vallad, Gary E. ;
Davis, R. Michael ;
Klosterman, Steven J. ;
Subbarao, Krishna V. .
PLANT DISEASE, 2011, 95 (10) :1224-1232
[6]   Population analyses of the vascular plant pathogen Verticillium dahliae detect recombination and transcontinental gene flow [J].
Atallah, Zahi K. ;
Maruthachalam, Karunakaran ;
du Toit, Lindsey ;
Koike, Steven T. ;
Davis, R. Michael ;
Klosterman, Steven J. ;
Hayes, Ryan J. ;
Subbarao, Krishna V. .
FUNGAL GENETICS AND BIOLOGY, 2010, 47 (05) :416-422
[7]   Genetic Diversity of Verticillium dahliae Populations From Olive and Potato in Lebanon [J].
Baroudy, Farah ;
Putman, Alexander, I ;
Habib, Wassim ;
Puri, Krishna D. ;
Subbarao, Krishna, V ;
Nigro, Franco .
PLANT DISEASE, 2019, 103 (04) :656-667
[8]   Long-Distance Spread of Verticillium dahliae Through Rivers and Irrigation Systems [J].
Baroudy, Farah ;
Habib, Wassim ;
Tanos, Ghassan ;
Gerges, Elvis ;
Saab, Carine ;
Choueiri, Elia ;
Nigro, Franco .
PLANT DISEASE, 2018, 102 (08) :1559-1565
[9]   Genetic Differentiation of Verticillium dahliae Populations Recovered from Symptomatic and Asymptomatic Hosts [J].
Bautista-Jalon, Laura S. ;
Frenkel, Omer ;
Lahkim, Leah Tsror ;
Malcolm, Glenna M. ;
Gugino, Beth K. ;
Lebiush, Sara ;
Hazanovsky, Marina ;
Milgroom, Michael G. ;
Jimenez-Gasco, Maria del Mar .
PHYTOPATHOLOGY, 2021, 111 (01) :149-159
[10]   Etiology, importance, and distribution of Verticillium wilt of cotton in southern Spain [J].
BejaranoAlcazar, J ;
BlancoLopez, MA ;
MeleroVara, JM ;
JimenezDiaz, RM .
PLANT DISEASE, 1996, 80 (11) :1233-1238