Switches in a genetic regulatory system under multiplicative non-Gaussian noise

被引:13
作者
Chen, Xi [1 ]
Kang, Yan-Mei [1 ]
Fu, Yu-Xuan [1 ]
机构
[1] Xi An Jiao Tong Univ, Sch Math & Stat, Xian 710049, Shaanxi, Peoples R China
关键词
Gene regulation; Non-negative system; Multiplicative non-Gaussian noise; Path integral; High-order perturbation expansion; LEVY NOISE; EXPRESSION; STOCHASTICITY; DYNAMICS; DRIVEN; CELLS; CONSEQUENCES; CONSTRAINTS; REPRESSOR; NETWORKS;
D O I
10.1016/j.jtbi.2017.09.010
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
The non-Gaussian noise is multiplicatively introduced to model the universal fluctuation in the gene regulation of the bacteriophage A. To investigate the key effect of non-Gaussian noise on the genetic on/off switch dynamics from the viewpoint of quantitative analysis, we employ the high-order perturbation expansion to deduce the stationary probability density of repressor concentration and the mean first passage time from low concentration to high concentration and vice versa. The occupation probability of different concentration states can be estimated from the height and shape of the peaks of the stationary probability density, which could be used to determine the overall expression level. A further concern is the mean first passage time, also referred to as the mean switching time, which can be adopted as an important measure to characterize the adaptability of gene expression to the environmental variation. Through our investigation, it is observed that the non-Gaussian heavy-tailed noise can better induce the switches between distinct genetic expression states and additionally, it accelerates the switching process more evidently compared to the Gaussian noise and the bounded noise. (C) 2017 Elsevier Ltd. All rights reserved.
引用
收藏
页码:134 / 144
页数:11
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