Method for persistent topological features extraction of schizophrenia patients' electroencephalography signal based on persistent homology

被引:7
作者
Guo, Guangxing [1 ,2 ,3 ]
Zhao, Yanli [4 ]
Liu, Chenxu [5 ]
Fu, Yongcan [5 ]
Xi, Xinhua [5 ]
Jin, Lizhong [6 ]
Shi, Dongli [5 ]
Wang, Lin [5 ]
Duan, Yonghong [3 ]
Huang, Jie [4 ]
Tan, Shuping [4 ]
Yin, Guimei [5 ]
机构
[1] Taiyuan Normal Univ, Coll Geog Sci, Jinzhong, Peoples R China
[2] Taiyuan Normal Univ, Inst Big Data Anal Technol & Applicat, Jinzhong, Peoples R China
[3] Shanxi Agr Univ, Coll Resource & Environm, Taigu, Peoples R China
[4] Peking Univ Huilongguan Clin, Beijing Huilongguan Hosp, Med Sch, Psychiat Res Ctr, Beijing, Peoples R China
[5] Taiyuan Normal Univ, Coll Comp Sci & Technol, Lab Data Min & Machine Learning, Jinzhong, Peoples R China
[6] Taiyuan Univ Sci & Technol, Coll Appl Sci, Taiyuan, Peoples R China
基金
中国国家自然科学基金;
关键词
topological data analysis; persistent homology; complex brain networks; schizophrenia patients; persistent topological features; EEG signal; BRAIN;
D O I
10.3389/fncom.2022.1024205
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
With the development of network science and graph theory, brain network research has unique advantages in explaining those mental diseases, the neural mechanism of which is unclear. Additionally, it can provide a new perspective in revealing the pathophysiological mechanism of brain diseases from the system level. The selection of threshold plays an important role in brain networks construction. There are no generally accepted criteria for determining the proper threshold. Therefore, based on the topological data analysis of persistent homology theory, this study developed a multi-scale brain network modeling analysis method, which enables us to quantify various persistent topological features at different scales in a coherent manner. In this method, the Vietoris-Rips filtering algorithm is used to extract dynamic persistent topological features by gradually increasing the threshold in the range of full-scale distances. Subsequently, the persistent topological features are visualized using barcodes and persistence diagrams. Finally, the stability of persistent topological features is analyzed by calculating the Bottleneck distances and Wasserstein distances between the persistence diagrams. Experimental results show that compared with the existing methods, this method can extract the topological features of brain networks more accurately and improves the accuracy of diagnostic and classification. This work not only lays a foundation for exploring the higher-order topology of brain functional networks in schizophrenia patients, but also enhances the modeling ability of complex brain systems to better understand, analyze, and predict their dynamic behaviors.
引用
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页数:14
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