Lebetimonas natsushimae sp nov., a novel strictly anaerobic, moderately thermophilic chemoautotroph isolated from a deep-sea hydrothermal vent polychaete nest in the Mid-Okinawa Trough

被引:16
作者
Nagata, Ryousuke [1 ]
Takaki, Yoshihiro [2 ]
Tame, Akihiro [3 ]
Nunoura, Takuro [4 ]
Muto, Hisashi [1 ]
Mino, Sayaka [5 ]
Sawayama, Shigeki [1 ]
Takai, Ken [2 ]
Nakagawa, Satoshi [1 ,2 ]
机构
[1] Kyoto Univ, Grad Sch Agr, Lab Marine Environm Microbiol, Oiwake Cho, Kyoto 6068502, Japan
[2] Japan Agcy Marine Earth Sci & Technol JAMSTEC, Dept Subsurface Geobiol Anal & Res D SUGAR, Yokosuka, Kanagawa, Japan
[3] Marine Works Japan Ltd, Dept Tech Serv, Yokosuka, Kanagawa, Japan
[4] Japan Agcy Marine Earth Sci & Technol JAMSTEC, Res & Dev Ctr Marine Biosci, Marine Funct Biol Grp, Yokosuka, Kanagawa, Japan
[5] Hokkaido Univ, Fac Fisheries Sci, Lab Microbiol, Hakodate, Hokkaido, Japan
关键词
Lebetimonas; Nautiliales; Epsilonproteobacteria; Chemoautotroph; Deep-sea hydrothermal vent; Thermophile; NITRATE-AMMONIFYING BACTERIUM; GEN; NOV; OXIDIZING CHEMOLITHOAUTOTROPH; SPECIES DEFINITION; GENOME ANNOTATION; SEQUENCE; EPSILONPROTEOBACTERIUM; DIVERSITY; ALGORITHM; SOFTWARE;
D O I
10.1016/j.syapm.2017.06.002
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
A moderately thermophilic, strictly anaerobic, chemoautotrophic bacterium, designated strain HS1857(T), was isolated from a deep-sea hydrothermal vent at the Noho site in the Mid-Okinawa Trough. Strain HS1857T grew between 35 and 63 degrees C (optimum 55 degrees C), in the presence of 10-55 g1(-1) NaC1 (optimum 25 g1(-1)), and pH 5.5-7.1 (optimum 6.4). Growth occurred with molecular hydrogen as the electron donor and elemental sulfur, nitrate, or selenate as the electron acceptors. Formate could serve as an alternative electron donor with nitrate as an electron acceptor. During growth with nitrate as the electron acceptor, strain HS1857(T) produced ammonium and formed a biofilm. CO2 was utilized as the sole carbon source. The G + C content of the genomic DNA was 33.2 mol%. Phylogenetic analysis of the 16S rRNA gene sequence indicated that strain HS1857(T) is a member of the order Nautiliales, showing a sequence similarity of 95.0% with Lebetimonas acidiphila Pd55(T). The fatty acid composition was similar to that of L. acidiphila, which was dominated by C-18:0 (47.0%) and C-18:1 (23.7%). Based on the genomic, chemotaxonomic, phenotypic characteristics, the name Lebetimonas natsushimae sp. nov., is proposed. The type strain is HS1857(T) (=NBRC 112478(T) = DSM 104102(T)). 2017 Elsevier GmbH. All rights reserved.
引用
收藏
页码:352 / 356
页数:5
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