Prostate Cancer Susceptibility in Men of African Ancestry at 8q24

被引:94
作者
Han, Ying [1 ]
Rand, Kristin A. [1 ]
Hazelett, Dennis J. [1 ]
Ingles, Sue A. [1 ,3 ]
Kittles, Rick A. [4 ,5 ]
Strom, Sara S. [6 ]
Rybicki, Benjamin A. [8 ]
Nemesure, Barbara [10 ]
Isaacs, William B. [11 ]
Stanford, Janet L. [12 ,14 ]
Zheng, Wei [15 ]
Schumacher, Fredrick R. [1 ,3 ]
Berndt, Sonja I. [16 ]
Wang, Zhaoming [16 ,17 ]
Xu, Jianfeng [18 ,19 ]
Rohland, Nadin [20 ,22 ]
Reich, David [20 ,21 ,22 ]
Tandon, Arti [20 ,22 ,29 ]
Pasaniuc, Bogdan [23 ,24 ]
Allen, Alex [20 ,22 ]
Quinque, Dominique [20 ,22 ]
Mallick, Swapan [20 ,21 ,22 ]
Notani, Dimple [25 ]
Rosenfeld, Michael G. [25 ]
Jayani, Ranveer Singh [25 ]
Kolb, Suzanne [12 ]
Gapstur, Susan M. [26 ]
Stevens, Victoria L. [26 ]
Pettaway, Curtis A. [7 ]
Yeboah, Edward D. [27 ,28 ]
Tettey, Yao [27 ,28 ]
Biritwum, Richard B. [27 ,28 ]
Adjei, Andrew A. [27 ,28 ]
Tay, Evelyn [27 ,28 ]
Truelove, Ann
Niwa, Shelley [29 ]
Chokkalingam, Anand P. [30 ]
John, Esther M. [31 ,32 ,33 ]
Murphy, Adam B. [34 ]
Signorello, Lisa B. [35 ]
Carpten, John [36 ]
Leske, M. Cristina [10 ]
Wu, Suh-Yuh [10 ]
Hennis, Anslem J. M. [10 ,37 ,38 ]
Neslund-Dudas, Christine [9 ]
Hsing, Ann W. [31 ,32 ,33 ]
Chu, Lisa [31 ,32 ,33 ]
Goodman, Phyllis J. [13 ]
Klein, Eric A. [39 ]
Zheng, S. Lilly [40 ]
机构
[1] Univ Southern Calif, Keck Sch Med, Dept Prevent Med, Los Angeles, CA 90089 USA
[2] Univ Southern Calif, Keck Sch Med, Dept Urol, Los Angeles, CA 90089 USA
[3] Univ Southern Calif, Norris Comprehens Canc Ctr, Los Angeles, CA 90089 USA
[4] Univ Arizona, Coll Med, Tucson, AZ 85724 USA
[5] Univ Arizona, Ctr Canc, Tucson, AZ 85724 USA
[6] Univ Texas MD Anderson Canc Ctr, Dept Epidemiol, Houston, TX 77030 USA
[7] Univ Texas MD Anderson Canc Ctr, Dept Urol, Houston, TX 77030 USA
[8] Henry Ford Hosp, Dept Publ Hlth Sci, Detroit, MI 48202 USA
[9] Henry Ford Hosp, Dept Publ Hlth Sci, Detroit, MI 48202 USA
[10] SUNY Stony Brook, Dept Prevent Med, Stony Brook, NY 11794 USA
[11] Johns Hopkins Hosp & Med Inst, James Buchanan Brady Urol Inst, Baltimore, MD 21205 USA
[12] Fred Hutchinson Canc Res Ctr, Div Publ Hlth Sci, 1124 Columbia St, Seattle, WA 98104 USA
[13] Fred Hutchinson Canc Res Ctr, SWOG Stat Ctr, 1124 Columbia St, Seattle, WA 98104 USA
[14] Univ Washington, Dept Epidemiol, Sch Publ Hlth, Seattle, WA 98195 USA
[15] Vanderbilt Univ, Sch Med, Vanderbilt Epidemiol Ctr, Div Epidemiol,Dept Med, Nashville, TN 37212 USA
[16] NCI, Div Canc Epidemiol & Genet, NIH, Bethesda, MD 20892 USA
[17] SAIC Frederick Inc, NCI DCEG, Canc Genom Res Lab, Frederick, MD 21702 USA
[18] NorthShore Univ HealthSyst, Program Personalized Canc Care, Evanston, IL 60201 USA
[19] NorthShore Univ HealthSyst, Dept Surg, Evanston, IL 60201 USA
[20] Harvard Univ, Harvard Med Sch, Dept Genet, Boston, MA 02115 USA
[21] Harvard Univ, Harvard Med Sch, Howard Hughes Med Inst, Boston, MA 02115 USA
[22] Broad Inst MIT & Harvard, Cambridge, MA 02142 USA
[23] Univ Calif Los Angeles, David Geffen Sch Med, Dept Pathol & Lab Med, Los Angeles, CA 90095 USA
[24] Univ Calif Los Angeles, David Geffen Sch Med, Dept Human Genet, Los Angeles, CA 90095 USA
[25] Univ Calif San Diego, Sch Med, Dept Med, Howard Hughes Med Inst, San Diego, CA 92103 USA
[26] Amer Canc Soc, Epidemiol Res Program, Atlanta, GA 30329 USA
[27] Korle Bu Teaching Hosp, Accra, Ghana
[28] Univ Ghana, Sch Med, Accra, Ghana
[29] Westat Corp, Rockville, MD 20850 USA
[30] Univ Calif Berkeley, Sch Publ Hlth, Berkeley, CA 94720 USA
[31] Canc Prevent Inst Calif, Fremont, CA 94538 USA
[32] Stanford Univ, Sch Med, Palo Alto, CA 94304 USA
[33] Stanford Canc Inst, Palo Alto, CA 94304 USA
[34] Northwestern Univ, Dept Urol, Chicago, IL 60611 USA
[35] Harvard Sch Publ Hlth, Dept Epidemiol, Boston, MA 02115 USA
[36] Translat Genom Res Inst, Phoenix, AZ 85004 USA
[37] Univ West Indies, Chron Dis Res Ctr, Bridgetown, Barbados
[38] Univ West Indies, Fac Med Sci, Bridgetown, Barbados
[39] Cleveland Clin, Glickman Urol & Kidney Inst, Cleveland, OH 44106 USA
[40] Wake Forest Sch Med, Ctr Canc Genom, Winston Salem, NC 27157 USA
[41] Univ Calif San Francisco, Dept Epidemiol & Biostat, San Francisco, CA 94143 USA
[42] Univ Calif San Francisco, Inst Human Genet, San Francisco, CA 94143 USA
[43] Makerere Univ, Coll Hlth Sci, Sch Publ Hlth, Kampala, Uganda
[44] Uro Care, Kampala, Uganda
来源
JNCI-JOURNAL OF THE NATIONAL CANCER INSTITUTE | 2016年 / 108卷 / 07期
基金
美国国家卫生研究院;
关键词
GENOME-WIDE ASSOCIATION; LONG NONCODING RNA; RANGE INTERACTION; RISK; LOCI; JAPANESE; VARIANT; PCAT-1; MYC;
D O I
10.1093/jnci/djv431
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
The 8q24 region harbors multiple risk variants for distinct cancers, including > 8 for prostate cancer. In this study, we conducted fine mapping of the 8q24 risk region (127.8-128.8 Mb) in search of novel associations with common and rare variation in 4853 prostate cancer case patients and 4678 control subjects of African ancestry. All statistical tests were two-sided. We identified three independent associations at P values of less than 5.00 x 10(-8), all of which were replicated in studies from Ghana and Uganda (combined sample = 5869 case patients, 5615 control subjects; rs114798100: risk allele frequency [RAF] = 0.04, per-allele odds ratio [OR] = 2.31, 95% confidence interval [CI] = 2.04 to 2.61, P = 2.38 x 10(-40); rs72725879: RAF = 0.33, OR = 1.37, 95% CI = 1.30 to 1.45, P = 3.04 x 10(-27); and rs111906932: RAF = 0.03, OR = 1.79, 95% CI = 1.53 to 2.08, P = 1.39 x 10(-13)). Risk variants rs114798100 and rs111906923 are only found in men of African ancestry, with rs111906923 representing a novel association signal. The three variants are located within or near a number of prostate cancer-associated long noncoding RNAs (lncRNAs), including PRNCR1, PCAT1, and PCAT2. These findings highlight ancestry-specific risk variation and implicate prostate-specific lncRNAs at the 8q24 prostate cancer susceptibility region.
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页数:5
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