Backbone and side-chain 13C and 15N signal assignments of the α-spectrin SH3 domain by magic angle spinning solid-state NMR at 17.6 tesla

被引:0
|
作者
Pauli, J
Baldus, M
van Rossum, B
de Groot, H
Oschkinat, H
机构
[1] Leiden Univ, Gorlaeus Labs, NL-2300 RA Leiden, Netherlands
[2] Dr B Van Rossum Forschungsinst Mol Pharmakol, D-13125 Berlin, Germany
关键词
NMR spectroscopy; protein structures; SH3; domains; solid-state structures; spectrin;
D O I
10.1002/1439-7633(20010401)2:4<272::AID-CBIC272>3.3.CO;2-U
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The backbone and side-chain C-13 and N-15 signals of a solid 62-residue (u-C-13,N-15)-labelled protein containing the alpha -spectrin SH3 domain were assigned by two-dimensional (2D) magic angle spinning (MAS) N-15- C-13 and C-13- C-13 dipolar correlation spectroscopy at 17.6 T. The side-chain signal sets of the individual amino acids were identified by 2D C-13-C-13 proton-driven spin diffusion and dipolar recoupling experiments. Correlations to the respective backbone nitrogen signals were established by 2D NCACX (CX = any carbon atom) experiments, which contain a proton - nitrogen and a nitrogen-carbon cross-polarisation step followed by a carbon-carbon homonuclear transfer unit Interresidue correlations leading to sequence-specific assignments were obtained from 2D NCOCX experiments. The assignment is nearly complete for the SH3 domain residues 7-61, while the signals of the N- and C-terminal residues 1-6 and 62, respectively, outside the domain boundaries are not detected in our MAS spectra. The resolution observed in these spectra raises expectations that receptor-bound protein ligands and slightly larger proteins (up to 20 kDa) can be readily assigned in the near future by using three-dimensional versions of the applied or analogous techniques.
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页码:272 / 281
页数:10
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