Scale-space spatio-temporal random fields: Application to the detection of growing microbial patterns from surface roughness

被引:3
作者
Ahmad, Ola [1 ]
Collet, Christophe [1 ]
机构
[1] Univ Strasbourg, CNRS, iCube, 300 Bd Sebastien Brant, F-67412 Illkirch Graffenstaden, France
关键词
Spatio-temporal modeling; Scale-space analysis; Gaussian random field; Detection; Surface roughness; Microbial patterns; GAUSSIAN KINEMATIC FORMULA; MULTIPLE-SCLEROSIS; UNKNOWN LOCATION; IMAGES; KERNEL; SIGNAL; FMRI;
D O I
10.1016/j.patcog.2016.03.034
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Spatio-temporal statistical models have been receiving increasing attention in a variety of image processing applications, notably for detecting noisy patterns or shapes during their temporal evolutions. Space-time models are however still limited to detect accurately spatio-temporal patterns of multi resolution properties. To this end, the present paper addresses the detection of spatio-temporal patterns from multitemporal images at multiple scales. We propose a new stochastic model that incorporates scale-space and space-time models based on random fields specifically, a scale space spatio-temporal Gaussian random field. Thereby, a statistical test to assess the null hypothesis (noise only) is computed by the expected Euler characteristic (EC) approach. A validation of our approach is investigated on synthetic examples using one dimensional signals. Then, a real application is carried out for detection of growing microorganisms from surface roughness, acquired at multiple time points. Based on the detection results, microbial colonies are thereafter discriminated through their scale and growth evolution. The results show the possibility of investigating robust and complete analysis in the context of precocious pattern detection. (C) 2016 Elsevier Ltd. All rights reserved.
引用
收藏
页码:27 / 38
页数:12
相关论文
共 27 条
[21]   Automatic detection and segmentation of evolving processes in 3D medical images: Application to multiple sclerosis [J].
Rey, D ;
Subsol, G ;
Delingette, H ;
Ayache, N .
MEDICAL IMAGE ANALYSIS, 2002, 6 (02) :163-179
[22]   A Bayesian signal detection procedure for scale-space random fields [J].
Rohani, M. Farid ;
Shafie, Khalil ;
Noorbaloochi, Siamak .
CANADIAN JOURNAL OF STATISTICS-REVUE CANADIENNE DE STATISTIQUE, 2006, 34 (02) :311-325
[23]   TESTING FOR A SIGNAL WITH UNKNOWN LOCATION AND SCALE IN A STATIONARY GAUSSIAN RANDOM-FIELD [J].
SIEGMUND, DO ;
WORSLEY, KJ .
ANNALS OF STATISTICS, 1995, 23 (02) :608-639
[24]   Spatio-Temporal Scan Statistics for the Detection of Outbreaks Involving Common Molecular Subtypes: Using Human Cases of Escherichia coli O157:H7 Provincial PFGE Pattern 8 (National Designation ECXAI.0001) in Alberta as an Example [J].
So, H. C. ;
Pearl, D. L. ;
von Koenigsloew, T. ;
Louie, M. ;
Chui, L. ;
Svenson, L. W. .
ZOONOSES AND PUBLIC HEALTH, 2013, 60 (05) :341-348
[25]   A Gaussian kinematic formula [J].
Taylor, JE .
ANNALS OF PROBABILITY, 2006, 34 (01) :122-158
[26]   Fully Bayesian spatio-temporal modeling of FMRI data [J].
Woolrich, MW ;
Jenkinson, M ;
Brady, JM ;
Smith, SM .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2004, 23 (02) :213-231
[27]   Testing for signals with unknown location and scale in a χ2 random field, with an application to fMRI [J].
Worsley, KJ .
ADVANCES IN APPLIED PROBABILITY, 2001, 33 (04) :773-793