Ranking inter-relationships between clusters

被引:3
作者
Wang, Tingting [1 ]
Chen, Feng [1 ]
Chen, Yi-Ping Phoebe [1 ]
机构
[1] La Trobe Univ, Dept Comp Sci & Comp Engn, Melbourne, Vic, Australia
基金
澳大利亚研究理事会;
关键词
relationship tree; conceptual clusters; mode pattern; mutual information; ACUTE LYMPHOBLASTIC-LEUKEMIA; DRUG DISCOVERY; GENE;
D O I
10.1080/00207721003710649
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
The evaluation of the relationships between clusters is important to identify vital unknown information in many real-life applications, such as in the fields of crime detection, evolution trees, metallurgical industry and biology engraftment. This article proposes a method called 'mode pattern + mutual information' to rank the interrelationship between clusters. The idea of the mode pattern is used to find outstanding objects from each cluster, and the mutual information criterion measures the close proximity of a pair of clusters. Our approach is different from the conventional algorithms of classifying and clustering, because our focus is not to classify objects into different clusters, but instead, we aim to rank the inter-relationship between clusters when the clusters are given. We conducted experiments on a wide range of real-life datasets, including image data and cancer diagnosis data. The experimental results show that our algorithm is effective and promising.
引用
收藏
页码:2071 / 2083
页数:13
相关论文
共 35 条
[1]  
AH, 2006, ENGINEERING, V18, P865
[2]   Finding edging genes from microarray data [J].
An, Jiyuan ;
Chen, Yi-Ping Phoebe .
JOURNAL OF BIOTECHNOLOGY, 2008, 135 (03) :233-240
[3]   DDR: an index method for large time-series datasets [J].
An, JY ;
Chen, YPP ;
Chen, HX .
INFORMATION SYSTEMS, 2005, 30 (05) :333-348
[4]  
[Anonymous], P 12 ACM SIGKDD INT, DOI DOI 10.1145/1150402.1150509
[5]   Effective dimension reduction methods for tumor classification using gene expression data [J].
Antoniadis, A ;
Lambert-Lacroix, S ;
Leblanc, F .
BIOINFORMATICS, 2003, 19 (05) :563-570
[6]  
BRESTSCHER O, 1997, LINEAR ALGEBRA APPL
[7]   CIDB: Chlamydia Interactive Database for cross-querying genomics, transcriptomics and proteomics data [J].
Chen, Yan ;
Timms, Peter ;
Chen, Yi-Ping Phoebe .
BIOMOLECULAR ENGINEERING, 2007, 24 (06) :603-608
[8]   Using bioinformatics techniques for gene identification in drug discovery and development [J].
Chen, Yi-Ping Phoebe ;
Chen, Feng .
CURRENT DRUG METABOLISM, 2008, 9 (06) :567-573
[9]  
Chen YPP, 2008, EXPERT OPIN THER TAR, V12, P383, DOI [10.1517/14728222.12.4.383 , 10.1517/14728222.12.4.383]
[10]   Clustering by compression [J].
Cilibrasi, R ;
Vitányi, PMB .
IEEE TRANSACTIONS ON INFORMATION THEORY, 2005, 51 (04) :1523-1545