Resolving human DNA mixtures with F-108 polymer and capillary electrophoresis single-strand conformational polymorphism analysis

被引:1
|
作者
Jordan, Deidra [1 ,2 ]
Mills, DeEtta [1 ,2 ]
机构
[1] Florida Int Univ, Dept Biol Sci, Miami, FL 33199 USA
[2] Florida Int Univ, Int Forens Res Inst, Miami, FL 33199 USA
基金
美国国家科学基金会;
关键词
F-108; polymer; forensic mixtures; short tandem repeats; single strand conformational polymorphisms; FORENSIC GENOMICS SYSTEM; SEQUENCE VARIATION; VALIDATION; COPOLYMER; DATABASE; SSCP; KIT;
D O I
10.1002/jssc.202000194
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
Current technologies have increased the sensitivity for analyzing forensic DNA samples, especially those considered "touch samples." Because of this, there has been an increase in the number of forensic mixtures-two or more contributors within a single sample-submitted to the crime laboratories. Therefore, the need to resolve these mixtures has increased as well. Several technologies are currently utilized, but many of them are time consuming and do not resolve the entire profile. Therefore, CE-Single-Strand Conformational Polymorphisms coupled with the Pluronic F-108 polymer was assessed for its ability to resolve human forensic mixtures. This technique has been able to detect sequence variation, such as single nucleotide polymorphism in short tandem repeat loci, such as D7S820 and vWA. Samples were first analyzed with the Performance Optimized Polymer-7, and mixtures created from samples that shared alleles. These samples were sequenced to detect single base-pair mutations and evaluated with the F-108 and CE-Single Strand Conformational Polymorphism analysis. Results from this study indicated the method would serve as a valuable screening tool to detect base sequence variation between individuals when they share alleles in a mixture and before using Massive Parallel Sequencing technology to distinguish which bases differ.
引用
收藏
页码:3327 / 3332
页数:6
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