Complete chloroplast genome sequence of Passiflora miniata (Passifloraceae)

被引：1

作者：

Mou, Hai-Fei ^{[1
]}

Wu, Yan-Yan ^{[1
]}

Fu, Long-Fei ^{[2
,3
]}

Zhang, Ying-Jun ^{[1
]}

Wen, Fang ^{[2
,3
]}

Liu, Jie-Yun ^{[1
]}

Tian, Qing-Lan ^{[1
]}

Huang, Wei-Hua ^{[1
]}

Wei, Yi-Gang ^{[2
,3
]}

机构：

[1] Guangxi Acad Agr Sci, Biotechnol Res Inst, Nanning, Peoples R China

[2] Guangxi Inst Bot, Guangxi Key Lab Plant Conservat & Restorat Ecol K, Guilin, Guangxi Zhuang, Peoples R China

[3] Chinese Acad Sci, Guilin, Peoples R China

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2020年 / 5卷 / 02期

关键词：

Plastid genome; Passifloraceae; phylogeny; rearrangement; TAXONOMIC REVISION; GENERA;

D O I：

10.1080/23802359.2020.1754952

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

The complete chloroplast genome of Passiflora miniata Vanderpl. was reported in this study. The cp genome was 149,573 bp in length including two inverted repeats (IRs) of 25,012 bp, which were separated by LSC and SSC of 86,070 bp and 13,479 bp, respectively. The GC content was 37.1%. The genome encoded 106 functional genes, including 72 protein-coding genes, 30 tRNA genes, and four rRNA genes. The maximum likelihood phylogenetic tree indicated that P. miniata was recovered in the clade of subg. Passiflora and most related to P. vitifolia. This newly reported plastid genome will provide essential data for further study on the phylogeny and evolution of the genus and family.

引用

页码：1910 / 1912

页数：3

共 12 条

[1]

De Wilde WJJO., 1972, Blumea, V20, P227

[2]

Doyle JJ, 1987, PHYTOCHEMISTRY B, V19, P11, DOI DOI 10.1016/0031-9422(80)85004-7

[3] A TAXONOMIC REVISION OF PASSIFLORA SECT. XEROGONA (PASSIFLORACEAE) USING PRINCIPAL COMPONENT ANALYSIS [J].

Espinoza, Tatiana Erika Boza ;

Jorgensen, Peter M. ;

MacDougal, John M. .

ANNALS OF THE MISSOURI BOTANICAL GARDEN, 2018, 103 (02) :258-313

[4] Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data [J].

Kearse, Matthew ;

Moir, Richard ;

Wilson, Amy ;

Stones-Havas, Steven ;

Cheung, Matthew ;

Sturrock, Shane ;

Buxton, Simon ;

Cooper, Alex ;

Markowitz, Sidney ;

Duran, Chris ;

Thierer, Tobias ;

Ashton, Bruce ;

Meintjes, Peter ;

Drummond, Alexei .

BIOINFORMATICS, 2012, 28 (12) :1647-1649

[5]

Killip E.P., 1938, Publications of the Field Museum of Natural History, botanical series, V19, P1

[6] New Insights into the Evolution of Passiflora subgenus Decaloba (Passifloraceae): Phylogenetic Relationships and Morphological Synapomorphies [J].

Krosnick, Shawn E. ;

Porter-Utley, Kristen E. ;

MacDougal, John M. ;

Jorgensen, Peter M. ;

McDade, Lucinda A. .

SYSTEMATIC BOTANY, 2013, 38 (03) :692-713

[7] Taxonomic Revision of Passiflora Subgenus Tetrapathea Including the Monotypic Genera Hollrungia and Tetrapathea (Passifloraceae), and a New Species of Passiflora [J].

Krosnick, Shawn E. ;

Ford, Andrew J. ;

Freudenstein, John V. .

SYSTEMATIC BOTANY, 2009, 34 (02) :375-385

[8] Comparative Analysis of Complete Chloroplast Genomes of Anemoclema, Anemone, Pulsatilla, and Hepatica Revealing Structural Variations Among Genera in Tribe Anemoneae (Ranunculaceae) [J].

Liu, Huijie ;

He, Jian ;

Ding, Chuanhua ;

Lyu, Rudan ;

Pei, Linying ;

Cheng, Jin ;

Xie, Lei .

FRONTIERS IN PLANT SCIENCE, 2018, 9

[9] Passiflora menghaiensis, a new species of Passifloraceae from Yunnan, China [J].

Ma, Xing-Da ;

Yan, Li-Chun ;

Krosnick, Shawn E. ;

Zhu, Ren-Bin ;

Shi, Ji-Pu ;

Shen, Jian-Yong .

TAIWANIA, 2019, 64 (02) :97-102

[10] EDIBLE SPECIES OF PASSIFLORA [J].

MARTIN, FW ;

NAKASONE, HY .

ECONOMIC BOTANY, 1970, 24 (03) :333-&

← 1 2 →