Genome-Wide Investigation of Heat Shock Transcription Factor Family in Wheat (Triticum aestivum L.) and Possible Roles in Anther Development

被引:27
作者
Ye, Jiali [1 ]
Yang, Xuetong [1 ]
Hu, Gan [1 ]
Liu, Qi [1 ]
Li, Wei [1 ]
Zhang, Lingli [1 ]
Song, Xiyue [1 ]
机构
[1] Northwest A&F Univ, Coll Agron, Yangling 712100, Shaanxi, Peoples R China
基金
中国国家自然科学基金;
关键词
evolution; genome-wide; heat shock transcription factor; thermo-sensitive male sterility; wheat; DNA-BINDING DOMAIN; STRESS-TOLERANCE; MOLECULAR CHAPERONES; DOSAGE-SENSITIVITY; ABIOTIC STRESSES; FACTORS HSFS; GENE; ARABIDOPSIS; PROTEINS; EXPRESSION;
D O I
10.3390/ijms21020608
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Heat shock transcription factors (HSFs) play crucial roles in resisting heat stress and regulating plant development. Recently, HSFs have been shown to play roles in anther development. Thus, investigating the HSF family members and identifying their protective roles in anthers are essential for the further development of male sterile wheat breeding. In the present study, 61 wheat HSF genes (TaHsfs) were identified in the whole wheat genome and they are unequally distributed on 21 chromosomes. According to gene structure and phylogenetic analyses, the 61 TaHsfs were classified into three categories and 12 subclasses. Genome-wide duplication was identified as the main source of the expansion of the wheat HSF gene family based on 14 pairs of homeologous triplets, whereas only a very small number of TaHsfs were derived by segmental duplication and tandem duplication. Heat shock protein 90 (HSP90), HSP70, and another class of chaperone protein called htpG were identified as proteins that interact with wheat HSFs. RNA-seq analysis indicated that TaHsfs have obvious period- and tissue-specific expression patterns, and the TaHsfs in classes A and B respond to heat shock, whereas the C class TaHsfs are involved in drought regulation. qRT-PCR identified three TaHsfA2bs with differential expression in sterile and fertile anthers, and they may be candidate genes involved in anther development. This comprehensive analysis provides novel insights into TaHsfs, and it will be useful for understanding the mechanism of plant fertility conversion.
引用
收藏
页数:21
相关论文
共 50 条
  • [41] Genome-Wide Identification and Expression Analysis of the Histone Deacetylase Gene Family in Wheat (Triticum aestivum L.)
    Jin, Peng
    Gao, Shiqi
    He, Long
    Xu, Miaoze
    Zhang, Tianye
    Zhang, Fan
    Jiang, Yaoyao
    Liu, Tingting
    Yang, Jin
    Yang, Jian
    Dai, Liangying
    Chen, Jianping
    [J]. PLANTS-BASEL, 2021, 10 (01): : 1 - 19
  • [42] Genome-wide identification and analysis of the UBA2 gene family in wheat (Triticum aestivum L.)
    Juan Li
    Chunge Cui
    Fengying Han
    Jin Liu
    [J]. BMC Genomics, 26 (1)
  • [43] Genome-wide identification and analysis of heat shock transcription factor family in cucumber (Cucumis sativus L.)
    Zhou, Shengjun
    Zhang, Peng
    Jing, Zange
    Shi, Jianlei
    [J]. PLANT OMICS, 2013, 6 (06) : 449 - 455
  • [44] Genome-wide identification and analysis of WD40 proteins in wheat (Triticum aestivum L.)
    Hu, Rui
    Xiao, Jie
    Gu, Ting
    Yu, Xiaofen
    Zhang, Yang
    Chang, Junli
    Yang, Guangxiao
    He, Guangyuan
    [J]. BMC GENOMICS, 2018, 19
  • [45] Genome-wide identification and characterization of gene family for RWP-RK transcription factors in wheat (Triticum aestivum L.)
    Kumar, Anuj
    Batra, Ritu
    Gahlaut, Vijay
    Gautam, Tinku
    Kumar, Sanjay
    Sharma, Mansi
    Tyagi, Sandhya
    Singh, Krishna Pal
    Balyan, Harindra Singh
    Pandey, Renu
    Gupta, Pushpendra Kumar
    [J]. PLOS ONE, 2018, 13 (12):
  • [46] Genome-Wide Identification and Characterization of the Oat (Avena sativa L.) WRKY Transcription Factor Family
    Liu, Kaiqiang
    Ju, Zeliang
    Jia, Zhifeng
    Liang, Guoling
    Ma, Xiang
    Liu, Wenhui
    [J]. GENES, 2022, 13 (10)
  • [47] Development of Genome-Wide Unique Indel Markers for a Heat-Sensitive Genotype in Wheat (Triticum aestivum L.)
    Zhai, Huijie
    Xu, Kunpeng
    Wang, Meng
    Wang, Zhenchuang
    Cai, Ziyang
    Li, Ao
    He, Anxin
    Xie, Xiaoming
    Chai, Lingling
    Liu, Mingjiu
    Ou, Xingqi
    Ni, Zhongfu
    [J]. AGRONOMY-BASEL, 2025, 15 (01):
  • [48] Genome-wide identification and expression analysis of the UBC gene family in wheat (Triticum aestivum L.)
    Gao, Weidong
    Zhang, Long
    Zhang, Yanyan
    Zhang, Peipei
    Shahinnia, Fahimeh
    Chen, Tao
    Yang, Delong
    [J]. BMC PLANT BIOLOGY, 2024, 24 (01)
  • [49] Genome-Wide Identification and Characterization of the E2F/DP Transcription Factor Family in Triticum aestivum L.
    Yu, Y.
    Wang, X. L.
    Zhang, Y. R.
    Song, T. Q.
    Zhang, S. X.
    Zhang, X. K.
    Chen, D. S.
    [J]. RUSSIAN JOURNAL OF PLANT PHYSIOLOGY, 2022, 69 (02)
  • [50] Genome-Wide Identification and Functional Characterization of the Chloride Channel TaCLC Gene Family in Wheat (Triticum aestivum L.)
    Mao, Peijun
    Run, Yonghang
    Wang, Hanghui
    Han, Changdong
    Zhang, Lijun
    Zhan, Kehui
    Xu, Haixia
    Cheng, Xiyong
    [J]. FRONTIERS IN GENETICS, 2022, 13