Profiling of differentially expressed genes in adipose tissues of multiple symmetric lipomatosis

被引:23
作者
Chen, Ke [1 ]
Wang, Linghao [1 ]
Yang, Wenjun [1 ]
Wang, Changfa [2 ]
Hu, Gui [2 ]
Mo, Zhaohui [1 ]
机构
[1] Cent S Univ, Xiangya Hosp 3, Dept Endocrinol, 138 Tong Zi Po Rd, Changsha 410013, Hunan, Peoples R China
[2] Cent S Univ, Xiangya Hosp 3, Dept General Surg, Changsha 410013, Hunan, Peoples R China
关键词
multiple symmetric lipomatosis; digital gene expression; differentially expressed genes; Gene Ontology; pathway; protein-protein interaction; TRANSLOCATOR PROTEIN TSPO; MADELUNGS DISEASE; BROWN FAT; OBESITY; CELLS; ADIPOCYTOKINES; ADIPOGENESIS; MODULATION; DIAGNOSIS; PATHWAY;
D O I
10.3892/mmr.2017.7437
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Multiple symmetric lipomatosis (MSL) is a rare disorder characterized by aberrant multiple and symmetric subcutaneous adipose tissue accumulation in the face, neck, shoulders, back, chest and abdomen, severely affecting the quality of life of patients. At present, precise MSL etiology and pathogenesis remain to be elucidated. The present study first utilized a digital gene expression technique with a nextgener-ation sequencing platform to profile differentially expressed genes in three cases of MSL vs. normal control tissue. cDNA libraries from these tissue specimens were constructed and DNA sequenced for identification of differentially expressed genes, which underwent bioinformatic analysis using the Gene Ontology (GO) enrichment, Kyoto Encyclopedia of Genes and Genomes (KEGG) and protein-protein interaction (PPI) network analyses. As a result, a total of 859 differentially expressed genes were identified, including 308 upregulated genes (C19orf80, Apelin, C21orf33, FAM166B and HSD11B2 were mostly upregulated 6.984-, 4.670-, 4.412-, 3.693- and 3.561-fold, respectively) and 551 downregulated genes [FosB proto-oncogene, AP-1 transcription factor subunit (FOSB), selectin (SEL) E, RAR related orphan receptor (ROR) B, salt inducible kinase (SIK) 1 and epidermal growth factor-like protein (EGFL) 6 were mostly downregulated -9.845, -8.243, -8.123, -7.702 and -7.664 fold, respectively). The GO functional enrichment analysis demonstrated these differentially expressed genes were predominantly involved in biological processes and cellular components, while the KEGG pathway enrichment analysis demonstrated that ribosome, nonalco-holic fatty liver disease, human T-lymphotropic virus type 1 (HTLV-I) infection and Alzheimer's disease pathways were altered in MSL. The PPI network data demonstrated ubiquitin C (UBC), translocator protein (TSPO), Jun Proto-Oncogene, AP-1 Transcription Factor (JUN) and FOS were among these differentially expressed genes that participated in regulation of adipocyte differentiation, although no previous study has linked them to MSL. In conclusion, the present study profiled differentially expressed genes in MSL and identified gene pathways that may be associated with MSL development and progression.
引用
收藏
页码:6570 / 6579
页数:10
相关论文
共 45 条
[1]  
Ardeleanu V, 2013, CHIRURGIA-BUCHAREST, V108, P580
[2]   Symmetric benign lipomatosis; Madelung syndrome [J].
Ballester Sanchez, Rosa ;
Navarro Mira, Miguel Angel ;
Pujol Marco, Conrad ;
Botella Estrada, Rafael .
MEDICINA CLINICA, 2013, 141 (08) :366-367
[3]   CONTROLLING THE FALSE DISCOVERY RATE - A PRACTICAL AND POWERFUL APPROACH TO MULTIPLE TESTING [J].
BENJAMINI, Y ;
HOCHBERG, Y .
JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY, 1995, 57 (01) :289-300
[4]   Madelung's Disease: Comorbidities, Fatty Mass Distribution, and Response to Treatment of 22 Patients [J].
Brea-Garcia, Beatriz ;
Cameselle-Teijeiro, Jose ;
Couto-Gonzalez, Ivan ;
Taboada-Suarez, Antonio ;
Gonzalez-Alvarez, Eduardo .
AESTHETIC PLASTIC SURGERY, 2013, 37 (02) :409-416
[5]  
Brodie B., 1846, LECT ILLUSTRATIVE VA, P275
[6]   miR-125a-3p and miR-483-5p promote adipogenesis via suppressing the RhoA/ROCK1/ERK1/2 pathway in multiple symmetric lipomatosis [J].
Chen, Ke ;
He, Honghui ;
Xie, Yanhong ;
Zhao, Liling ;
Zhao, Shaoli ;
Wan, Xinxing ;
Yang, Wenjun ;
Mo, Zhaohui .
SCIENTIFIC REPORTS, 2015, 5
[7]   Multiple Symmetric Lipomatosis: Substantial Subcutaneous Adipose Tissue Accumulation Did Not Induce Glucose and Lipid Metabolism Dysfunction [J].
Chen, Ke ;
Xie, Yanhong ;
Hu, Pinan ;
Zhao, Shaoli ;
Mo, Zhaohui .
ANNALS OF NUTRITION AND METABOLISM, 2010, 57 (01) :68-73
[8]   Intracellular Protein Degradation: From a Vague Idea through the Lysosome and the Ubiquitin-Proteasome System and onto Human Diseases and Drug Targeting [J].
Ciechanover, Aaron .
NEURODEGENERATIVE DISEASES, 2012, 10 (1-4) :7-22
[9]  
Cojocaru DC, 2013, MED-SURG J, V117, P404
[10]  
Cumming Paul, 2012, Curr Top Behav Neurosci, V11, P117, DOI 10.1007/7854_2011_165