Inter-Laboratory Comparison of RT-PCR-Based Methods for the Detection of Tomato Brown Rugose Fruit Virus on Tomato

被引:14
作者
Luigi, Marta [1 ]
Manglli, Ariana [1 ]
Tiberini, Antonio [1 ]
Bertin, Sabrina [1 ]
Ferretti, Luca [1 ]
Taglienti, Anna [1 ]
Faggioli, Francesco [1 ]
Tomassoli, Laura [1 ]
机构
[1] Council Agr Res & Econ CREA DC, Res Ctr Plant Protect & Certificat, Via CG Bertero 22, I-00156 Rome, Italy
基金
欧盟地平线“2020”;
关键词
ToBRFV; conventional RT-PCR; real-time RT-PCR; validation; performance criteria; TPS;
D O I
10.3390/pathogens11020207
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
In 2020, a test performance study (TPS) for the specific detection of tomato brown rugose fruit virus (ToBRFV) was organized in the frame of the H2020 Valitest project. Since no validated tests were available, all the protocols reported in the literature were at first screened, performing preliminary studies in accordance with the EPPO standard PM 7/98 (4). Five molecular tests, two conventional RT-PCR and three real-time RT-PCR were found to be suitable and were included in the TPS. Thirty-four laboratories from 18 countries worldwide took part in TPS, receiving a panel of 22 blind samples. The panel consisted of sap belonging to symptomatic or asymptomatic leaves of Solanum lycopersicum and Capsicum annuum. The results returned by each laboratory were analyzed and diagnostic parameters were assessed for each test: reproducibility, repeatability, analytical sensitivity, diagnostic sensitivity and diagnostic specificity. All the evaluated tests resulted in being reliable in detecting ToBRFV and were included in an EPPO Standard PM 7/146-Diagnostics.
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页数:12
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