A classification study of human β3-adrenergic receptor agonists using BCUT descriptors

被引:10
作者
Hao, Ming [1 ]
Li, Yan [1 ]
Wang, Yonghua [2 ]
Zhang, Shuwei [1 ]
机构
[1] Dalian Univ Technol, Dept Mat Sci & Chem Engn, Dalian 116024, Liaoning, Peoples R China
[2] NW A&F Univ, Ctr Bioinformat, Yangling 71210, Shaanxi, Peoples R China
基金
中国国家自然科学基金;
关键词
Human beta(3)-adrenergic receptor agonists; Variable selection; Dragon descriptors; Random forest; BENZOIC-ACID DERIVATIVES; GOOD ORAL BIOAVAILABILITY; HIGHLY POTENT; OVERACTIVE BLADDER; RANDOM FOREST; DISCOVERY; QSAR; PREDICTION; BIPHENYL; SERIES;
D O I
10.1007/s11030-011-9321-6
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Experimental EC(50)s for 202 human beta(3)-AR agonists are used to develop classification models as a potential screening tool for a large library of target compounds before synthesis. A variable selection approach from random forests (VS-RF) is used to extract the structural information most relevant to the human beta(3)-AR activation properties of the collected data set. The obtained results indicate that the VS-RF method can be used for variable selection with smallest sets of non-redundant descriptors with highly predictive accuracy (Q(ex)%=96% for the external prediction set). Thus, the proposed VS-RF models should be helpful for screening of potential human beta(3)-AR agonists before chemical synthesis in drug development.
引用
收藏
页码:877 / 887
页数:11
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