Accuracy of Td-DFT in the Ultraviolet and Circular Dichroism Spectra of Deoxyguanosine and Uridine

被引:12
作者
Miyahara, Tomoo [1 ]
Nakatsuji, Hiroshi [1 ]
机构
[1] Kyoto Technosci Ctr 16, Quantum Chem Res Inst, Sakyou Ku, 14 Yoshida Kawara Machi, Kyoto 6068305, Japan
关键词
SYMMETRY-ADAPTED-CLUSTER; GENERALIZED GRADIENT APPROXIMATION; PHOTOSYNTHETIC REACTION-CENTER; HYBRID DENSITY FUNCTIONALS; COLOR-TUNING MECHANISM; RANGE-SEPARATED HYBRID; EXCITED-STATES; WAVE-FUNCTION; RHODOPSEUDOMONAS-VIRIDIS; NONCOVALENT INTERACTIONS;
D O I
10.1021/acs.jpca.7b09733
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Accuracy of the time-dependent density functional theory (Td-DFT) was examined for the ultraviolet (UV) and circular dichroism (CD) spectra of deoxyguanosine (dG) and uridine, using 11 different DFT functionals and two different basis sets. The Td-DFT results of the UV and CD spectra were strongly dependent on the functionals used. The basis-set dependence was observed only for the CD spectral calculations. For the UV spectra, the B3LYP and PBEO functionals gave relatively good results. For the CD spectra, the B3LYP and PBEO with 6-311G(d,p) basis gave relatively permissible result only for dG. The results of other functionals were difficult to be used for the studies of the UV and CD spectra, though the symmetry adapted cluster-configuration interaction (SAC-CI) method reproduced well the experimental spectra of these molecules. To obtain valuable information from the theoretical calculations of the UV and CD spectra, the theoretical tool must be able to reproduce correctly both of the intensities and peak positions of the UV and CD spectra. Then, we can analyze the reasons of the changes of the intensity and/or the peak position to clarify the chemistry involved. It is difficult to recommend Td-DFT as such tools of science, at least from the examinations using dG and uridine.
引用
收藏
页码:100 / 118
页数:19
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