Molecular architecture of the HerA-NurA DNA double-strand break resection complex

被引:14
作者
Byrne, Robert Thomas [1 ,2 ]
Schuller, Jan Michael [3 ]
Unverdorben, Pia [3 ]
Foerster, Friedrich [3 ]
Hopfner, Karl-Peter [1 ,2 ,4 ]
机构
[1] Univ Munich, Gene Ctr, D-81377 Munich, Germany
[2] Univ Munich, Dept Biochem, D-81377 Munich, Germany
[3] Max Planck Inst Biochem, Dept Mol Struct Biol, D-82152 Martinsried, Germany
[4] Ctr Integrated Prot Sci, Munich, Germany
基金
欧洲研究理事会;
关键词
DNA double-strand break repair; Cryo-electron microscopy; Nuclease; DNA resection; FtsK/HerA ATPase; END-RESECTION; CRYSTAL-STRUCTURE; CHI RECOGNITION; RECBCD ENZYME; HELICASE; MRE11; PROTEIN; REPAIR; RAD50; SGS1;
D O I
10.1016/j.febslet.2014.10.035
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
DNA double-strand breaks can be repaired by homologous recombination, during which the DNA ends are long-range resected by helicase-nuclease systems to generate 30 single strand tails. In archaea, this requires the Mre11-Rad50 complex and the ATP-dependent helicase-nuclease complex HerA-NurA. We report the cryo-EM structure of Sulfolobus solfataricus HerA-NurA at 7.4 angstrom resolution and present the pseudo-atomic model of the complex. HerA forms an ASCE hexamer that tightly interacts with a NurA dimer, with each NurA protomer binding three adjacent HerA HAS domains. Entry to NurA's nuclease active sites requires dsDNA to pass through a 23 angstrom wide channel in the HerA hexamer. The structure suggests that HerA is a dsDNA translocase that feeds DNA into the NurA nuclease sites. (C) 2014 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.
引用
收藏
页码:4637 / 4644
页数:8
相关论文
共 46 条
[1]   Early steps of double-strand break repair in Bacillus subtilis [J].
Alonso, Juan C. ;
Cardenas, Paula P. ;
Sanchez, Humberto ;
Hejna, James ;
Suzuki, Yuki ;
Takeyasu, Kunio .
DNA REPAIR, 2013, 12 (03) :162-176
[2]   Near-atomic resolution structural model of the yeast 26S proteasome [J].
Beck, Florian ;
Unverdorben, Pia ;
Bohn, Stefan ;
Schweitzer, Andreas ;
Pfeifer, Guenter ;
Sakata, Eri ;
Nickell, Stephan ;
Plitzko, Juergen M. ;
Villa, Elizabeth ;
Baumeister, Wolfgang ;
Foerster, Friedrich .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2012, 109 (37) :14870-14875
[3]   End-resection at DNA double-strand breaks in the three domains of life [J].
Blackwood, John K. ;
Rzechorzek, Neil J. ;
Bray, Sian M. ;
Maman, Joseph D. ;
Pellegrini, Luca ;
Robinson, Nicholas P. .
BIOCHEMICAL SOCIETY TRANSACTIONS, 2013, 41 :314-320
[4]   Structural and functional insights into DNA-end processing by the archaeal HerA helicase-NurA nuclease complex [J].
Blackwood, John K. ;
Rzechorzek, Neil J. ;
Abrams, Andrew S. ;
Maman, Joseph D. ;
Pellegrini, Luca ;
Robinson, Nicholas P. .
NUCLEIC ACIDS RESEARCH, 2012, 40 (07) :3183-3196
[5]   DNA end resection by Dna2-Sgs1-RPA and its stimulation by Top3-Rmi1 and Mre11-Rad50-Xrs2 [J].
Cejka, Petr ;
Cannavo, Elda ;
Polaczek, Piotr ;
Masuda-Sasa, Taro ;
Pokharel, Subhash ;
Campbell, Judith L. ;
Kowalczykowski, Stephen C. .
NATURE, 2010, 467 (7311) :112-U149
[6]   Crystal structure of the NurA-dAMP-Mn2+ complex [J].
Chae, Jina ;
Kim, Young Chang ;
Cho, Yunje .
NUCLEIC ACIDS RESEARCH, 2012, 40 (05) :2258-2270
[7]   Repair of Double-Strand Breaks by End Joining [J].
Chiruvella, Kishore K. ;
Liang, Zhuobin ;
Wilson, Thomas E. .
COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY, 2013, 5 (05)
[8]   A bipolar DNA helicase gene, herA, clusters with rad50, mre11 and nurA genes in thermophilic archaea [J].
Constantinesco, F ;
Forterre, P ;
Koonin, EV ;
Aravind, L ;
Elie, C .
NUCLEIC ACIDS RESEARCH, 2004, 32 (04) :1439-1447
[9]   NurA, a novel 5′-3′ nuclease gene linked to rad50 and mre11 homologs of thermophilic Archaea [J].
Constantinesco, F ;
Forterre, P ;
Elie, C .
EMBO REPORTS, 2002, 3 (06) :537-542
[10]   RecBCD Enzyme and the Repair of Double-Stranded DNA Breaks [J].
Dillingham, Mark S. ;
Kowalczykowski, Stephen C. .
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS, 2008, 72 (04) :642-+