Bond Graph Representation of Chemical Reaction Networks

被引：12
作者：
Gawthrop, Peter [1 ]
Crampin, Edmund J. [2 ]
机构：
[1] Univ Melbourne, Dept Elect & Elect Engn, Melbourne, Vic 3010, Australia
[2] Univ Melbourne, Sch Math & Stat, Melbourne, Vic 3010, Australia
来源：
IEEE TRANSACTIONS ON NANOBIOSCIENCE | 2018年 / 17卷 / 04期
关键词：
Biological system modeling; computational systems biology; systems biology; MASS-ACTION KINETICS; SYSTEMS; DYNAMICS; THERMODYNAMICS; COMPLEX;
D O I：
10.1109/TNB.2018.2876391
中图分类号：
Q5 [生物化学];
学科分类号：
071010 ; 081704 ;
摘要：
The Bond Graph approach and the Chemical Reaction Network approach for modeling the biomolecular systems were developed independently. This paper brings together the two approaches by providing a bond graph interpretation of the chemical reaction network concept of complexes. Both closed and open systems are discussed. The method is illustrated using a simple enzyme-catalyzed reaction and a trans-membrane transporter.
引用
收藏
页码：449 / 455
页数：7
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