bcROCsurface: an R package for correcting verification bias in estimation of the ROC surface and its volume for continuous diagnostic tests

被引:6
作者
Duc, Khanh To [1 ]
机构
[1] Univ Padua, Dept Stat Sci, Via C Battisti 241, I-35121 Padua, Italy
关键词
Software; R package; ROC surface analysis; Missing at random;
D O I
10.1186/s12859-017-1914-3
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Background: Receiver operating characteristic (ROC) surface analysis is usually employed to assess the accuracy of a medical diagnostic test when there are three ordered disease status (e.g. non-diseased, intermediate, diseased). In practice, verification bias can occur due to missingness of the true disease status and can lead to a distorted conclusion on diagnostic accuracy. In such situations, bias-corrected inference tools are required. Results: This paper introduce an R package, named bcROCsurface, which provides utility functions for verification bias-corrected ROC surface analysis. The shiny web application of the correction for verification bias in estimation of the ROC surface analysis is also developed. Conclusion: bcROCsurface may become an important tool for the statistical evaluation of three-class diagnostic markers in presence of verification bias. The R package, readme and example data are available on CRAN. The web interface enables users less familiar with R to evaluate the accuracy of diagnostic tests, and can be found at http://khanhtoduc.shinyapps.io/bcROCsurface_shiny/.
引用
收藏
页数:5
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