2D-dynamic representation of DNA sequences

被引:67
作者
Bielinska-Waz, Dorota
Clark, Timothy
Waz, Piotr
Nowak, Wieslaw
Nandy, Ashesh
机构
[1] Nicholas Copernicus Univ, Inst Phys, PL-87100 Torun, Poland
[2] Univ Erlangen Nurnberg, Comp Chem Ctr, D-91052 Erlangen, Germany
[3] Univ Erlangen Nurnberg, Interdisciplinary Ctr Mol Mat, D-91052 Erlangen, Germany
[4] Nicholas Copernicus Univ, Ctr Astron, PL-87100 Torun, Poland
[5] Jadavpur Univ, Environm Sci Program, Kolkata 700032, W Bengal, India
关键词
D O I
10.1016/j.cplett.2007.05.050
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
A new 'dynamic' 2D-graphical representation of DNA sequences is presented. The model is based on 2D-plots that have been used before and are easy to visualize, but it removes many degeneracies present in the previous approaches. The moments of inertia of the 'dynamic' graphs are proposed as a new kind of descriptor for DNA sequences. (C) 2007 Elsevier B.V. All rights reserved.
引用
收藏
页码:140 / 144
页数:5
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