Development and Validation of Ten-RNA Binding Protein Signature Predicts Overall Survival in Osteosarcoma

被引:9
作者
Zhang, Jian [1 ,2 ]
Miao, Xinxin [1 ,2 ]
Wu, Tianlong [1 ,3 ]
Jia, Jingyu [1 ]
Cheng, Xigao [1 ,2 ,3 ]
机构
[1] Nanchang Univ, Affiliated Hosp 2, Dept Orthoped, Nanchang, Jiangxi, Peoples R China
[2] Inst Orthoped Jiangxi Prov, Nanchang, Jiangxi, Peoples R China
[3] Nanchang Univ, Inst Minimally Invas Orthoped, Nanchang, Jiangxi, Peoples R China
关键词
RNA-binding protein; osteosarcoma; prognostic signature; overall survival; nomogram; RNA; CANCER; BIOLOGY; EXPRESSION; CHILDHOOD; IMMUNITY; GROWTH; EIF4E3; TUMORS; STAT3;
D O I
10.3389/fmolb.2021.751842
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Osteosarcoma is a malignant tumor that originates in the bones with the characteristics of high malignancy, predisposition to metastasis, and poor prognosis. RNA binding proteins (RBPs) are closely related to various tumors, but their relationship with osteosarcoma remains unclear. Based on GTEx and TARGET RNA sequencing data, we applied differential analysis to obtain RBP genes that are differentially expressed in osteosarcoma, and analyzed the functions of these RBPs. After applying univariate and LASSO Cox regression analysis, 10 key prognostic RBPs (TDRD6, TLR8, NXT2, EIF4E3, RPS27L, CPEB3, RBM34, TERT, RPS29, and ZC3HAV1) were screened, and an RBP prognostic risk assessment model for patients with osteosarcoma was established. The independent cohort GSE21257 was used for external verification, and the results showed that the signature has an excellent ability to predict prognosis. In addition, a nomogram that can be used for clinical evaluation was constructed. Finally, the expression levels of 10 prognostic RBPs in osteosarcoma cells and tissues were confirmed through experiments. Our study identified a ten-gene prognostic marker related to RBP, which is of great significance for adjusting the treatment strategy of patients with osteosarcoma and exploring prognostic markers.
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页数:13
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