Identification of key genes from the visceral adipose tissues of overweight/obese adults with hypertension through transcriptome sequencing

被引:3
|
作者
Liao, Lanlan [1 ,2 ]
Zhang, Lihui [2 ,4 ]
Chen, Hongping [2 ,4 ]
Teng, Da [2 ,4 ]
Xu, Bowen [1 ,2 ]
Gong, Lei [2 ]
Zhong, Lin [2 ]
Wang, Chunxiao [2 ]
Dong, Haibin [2 ]
Jia, Wenjuan [2 ]
Yang, Jun [2 ,5 ]
Shi, Zhen [3 ,6 ]
机构
[1] Binzhou Med Univ, Clin Med Coll 2, Yantai, Peoples R China
[2] Yantai Yuhuangding Hosp, Dept Cardiol, Yantai, Peoples R China
[3] Binzhou Med Univ, Basic Med Coll, Yantai, Peoples R China
[4] Qingdao Univ, Med Coll, Qingdao, Peoples R China
[5] Yantai Yuhuangding Hosp, Dept Cardiol, 20 Yuhuangding East Rd, Yantai, Shangdong, Peoples R China
[6] Binzhou Med Univ, Basic Med Coll, 346 Guanhai Rd, Yantai, Shangdong, Peoples R China
关键词
RECEPTOR; 4; OBESITY;
D O I
10.1159/000528702
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Overweight and obese (OW/OB) adults are at increased risk of hypertension due to visceral adipose tissue (VAT) inflammation. In this study, we explored gene level differences in the VAT of hypertensive and normotensive OW/OB patients. VAT samples obtained from six OW/OB adults (three hypertensive, three normotensive) were subjected to transcriptome sequencing analysis. Gene set enrichment analysis was conducted for all gene expression data to identify differentially expressed genes (DEGs) with |log2 (fold change)| >= 1 and q < 0.05. Gene Ontology and Kyoto Encyclopedia of Genes and Genomes functional enrichment analyses were performed on the DEGs and hub genes were identified by constructing a protein-protein interaction (PPI) network. The proposed hub genes were validated using quantitative real-time PCR in ten other samples from five hypertensive and five normotensive patients. In addition, we performed ROC analysis and spearman correlation analysis. A total of 84 DEGs were identified between VAT samples from OW/OB patients with and without hypertension, among which 21 were significantly up-regulated and 63 were significantly down-regulated. Bioinformatics analysis revealed that spleen function was related to hypertension in OW/OB adults. Meanwhile, PPI network analysis identified the following top 10 hub genes: CD79A, CR2, SELL, CD22, IL7R, CCR7, TNFRSF13C, CXCR4, POU2AF1, and JAK3. Through qPCR verification, we found that CXCR4, CD22 and IL7R were statistically significant. QPCR verification suggested that RELA were statistically significant. However, qPCR verification indicated that NF-KB1 and KLF2 were not statistically significant. These hub genes were mainly regulated by the transcription factors RELA. The AUC of ROC analysis for CXCR4, IL7R and CD22 was 0.92. What's more, VAT CXCR4 and CD22 were positively related to RELA relative expression levels. Take together, our research demonstrates that CXCR4, IL7R and CD22 related to VAT in hypertensive OW/OB adults could serve as future therapeutic targets.
引用
收藏
页码:541 / 559
页数:31
相关论文
共 50 条
  • [1] Calcium and vitamin D supplementation is associated with decreased abdominal visceral adipose tissue in overweight and obese adults
    Rosenblum, Jennifer L.
    Castro, Victor M.
    Moore, Carolyn E.
    Kaplan, Lee M.
    AMERICAN JOURNAL OF CLINICAL NUTRITION, 2012, 95 (01): : 101 - 108
  • [2] Identification of Key Genes Associated With Early Calf-Hood Nutrition in Subcutaneous and Visceral Adipose Tissues by Co-Expression Analysis
    Pan, Cuili
    Yang, Chaoyun
    Ma, Yanfen
    Sheng, Hui
    Lei, Zhaoxiong
    Wang, Shuzhe
    Hu, Honghong
    Feng, Xue
    Zhang, Junxing
    Ma, Yun
    FRONTIERS IN VETERINARY SCIENCE, 2022, 9
  • [3] Identification of key genes and pathways involved in response to pain in goat and sheep by transcriptome sequencing
    Deng, Xiuling
    Wang, Dong
    Wang, Shenyuan
    Wang, Haisheng
    Zhou, Huanmin
    BIOLOGICAL RESEARCH, 2018, 51
  • [4] Identification of key genes and pathways involved in response to pain in goat and sheep by transcriptome sequencing
    Xiuling, D.
    Haisheng, W.
    EUROPEAN JOURNAL OF IMMUNOLOGY, 2019, 49 : 231 - 231
  • [5] Identification of key genes and pathways involved in response to pain in goat and sheep by transcriptome sequencing
    Xiuling Deng
    Dong Wang
    Shenyuan Wang
    Haisheng Wang
    Huanmin Zhou
    Biological Research, 51
  • [6] Identification of Genes Involved in Flavonoid Biosynthesis in Sophora japonica Through Transcriptome Sequencing
    Zhang, Fu-Sheng
    Wang, Qian-Yu
    Pu, Ya-Jie
    Chen, Tong-Yao
    Qin, Xue-Mei
    Gao, Jie
    CHEMISTRY & BIODIVERSITY, 2017, 14 (12)
  • [7] Identification of differentially expressed genes in omental adipose tissues of obese patients by suppression subtractive hybridization
    Qiu, Jie
    Ni, Yu-Hui
    Gong, Hai-Xia
    Fei, Li
    Pan, Xiao-Qin
    Guo, Mei
    Chen, Rong-Hua
    Guo, Xi-Rong
    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2007, 352 (02) : 469 - 478
  • [8] Identification of Key Genes Regulating Sorghum Mesocotyl Elongation through Transcriptome Analysis
    Ju, Lan
    Lv, Na
    Yin, Feng
    Niu, Hao
    Yan, Haisheng
    Wang, Yubin
    Fan, Fangfang
    Lv, Xin
    Chu, Jianqiang
    Ping, Junai
    GENES, 2023, 14 (06)
  • [9] Comparison of the release of adipokines by adipose tissue, adipose tissue matrix, and Adipocytes from visceral and subcutaneous abdominal adipose tissues of obese humans
    Fain, JN
    Madan, AK
    Hiler, ML
    Cheema, P
    Bahouth, SW
    ENDOCRINOLOGY, 2004, 145 (05) : 2273 - 2282
  • [10] Identification of key genes and their association with immune infiltration in adipose tissue of obese patients: a bioinformatic analysis
    Wen, Jie
    Wang, Liwen
    ADIPOCYTE, 2022, 11 (01) : 401 - 412