Genome Sequence of Desulfosporosinus sp OT, an Acidophilic Sulfate-Reducing Bacterium from Copper Mining Waste in Norilsk, Northern Siberia

被引:28
作者
Abicht, Helge K. [1 ]
Mancini, Stefano [1 ]
Karnachuk, Olga V. [2 ]
Solioz, Marc [1 ]
机构
[1] Univ Bern, Dept Clin Res, CH-3010 Bern, Switzerland
[2] Tomsk VV Kuibyshev State Univ, Dept Plant Physiol & Biotechnol, Tomsk 634050, Russia
关键词
SEDIMENTS; HOMEOSTASIS; REDUCTION;
D O I
10.1128/JB.06018-11
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
We have sequenced the genome of Desulfosporosinus sp. OT, a Gram-positive, acidophilic sulfate-reducing Firmicute isolated from copper tailing sediment in the Norilsk mining-smelting area in Northern Siberia, Russia. This represents the first sequenced genome of a Desulfosporosinus species. The genome has a size of 5.7 Mb and encodes 6,222 putative proteins.
引用
收藏
页码:6104 / 6105
页数:2
相关论文
共 16 条
[1]   Desulfosporosinus acidiphilus sp nov.: a moderately acidophilic sulfate-reducing bacterium isolated from acid mining drainage sediments [J].
Alazard, Didier ;
Joseph, Manon ;
Battaglia-Brunet, Fabienne ;
Cayol, Jean-Luc ;
Ollivier, Bernard .
EXTREMOPHILES, 2010, 14 (03) :305-312
[2]   Copper ions stimulate polyphosphate degradation and phosphate efflux in Acidithiobacillus ferrooxidans [J].
Alvarez, S ;
Jerez, CA .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 70 (09) :5177-5182
[3]   Solution structure of CopC: A cupredoxin-like protein involved in copper homeostasis [J].
Arnesano, F ;
Banci, L ;
Bertini, I ;
Thompsett, AR .
STRUCTURE, 2002, 10 (10) :1337-1347
[4]  
Ausubel R. M., 1995, CURRENT PROTOCOLS MO
[5]   Heavy Metal Tolerance of Fe(III)-Reducing Microbial Communities in Contaminated Creek Bank Soils [J].
Burkhardt, Eva-Maria ;
Bischoff, Sebastian ;
Akob, Denise M. ;
Buechel, Georg ;
Kuesel, Kirsten .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2011, 77 (09) :3132-3136
[6]   Significant Association between Sulfate-Reducing Bacteria and Uranium-Reducing Microbial Communities as Revealed by a Combined Massively Parallel Sequencing-Indicator Species Approach [J].
Cardenas, Erick ;
Wu, Wei-Min ;
Leigh, Mary Beth ;
Carley, Jack ;
Carroll, Sue ;
Gentry, Terry ;
Luo, Jian ;
Watson, David ;
Gu, Baohua ;
Ginder-Vogel, Matthew ;
Kitanidis, Peter K. ;
Jardine, Philip M. ;
Zhou, Jizhong ;
Criddle, Craig S. ;
Marsh, Terence L. ;
Tiedje, James M. .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2010, 76 (20) :6778-6786
[7]   Geomicrobiology of La Zarza-Perrunal Acid Mine Effluent (Iberian Pyritic Belt, Spain) [J].
Gonzalez-Toril, Elena ;
Aguilera, Angeles ;
Souza-Egipsy, Virginia ;
Lopez Pamo, Enrique ;
Sanchez Espana, Javier ;
Amils, Ricardo .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2011, 77 (08) :2685-2694
[8]   Bacteria of the sulfur cycle in the sediments of gold mine tailings, Kuznetsk Basin, Russia [J].
Karnachuk, O. V. ;
Gerasimchuk, A. L. ;
Banks, D. ;
Frengstad, B. ;
Stykon, G. A. ;
Tikhonova, Z. L. ;
Kaksonen, A. ;
Puhakka, J. ;
Yanenko, A. S. ;
Pimenov, N. V. .
MICROBIOLOGY, 2009, 78 (04) :483-491
[9]   Precipitation of cu-sulfides by copper-tolerant Desulfovibrio isolates [J].
Karnachuk, Olia V. ;
Sasaki, Keiko ;
Gerasimchuk, Anna L. ;
Sukhanova, Olga ;
Ivasenko, Denis A. ;
Kaksonen, Anna H. ;
Puhakka, Jaakko A. ;
Tuovinen, Olli H. .
GEOMICROBIOLOGY JOURNAL, 2008, 25 (05) :219-227
[10]   Sulfate reduction potential in sediments in the Norilsk mining area, northern Siberia [J].
Karnachuk, OV ;
Pimenov, NV ;
Yusupov, SK ;
Frank, YA ;
Kaksonen, AH ;
Puhakka, JA ;
Ivanov, MV ;
Lindström, EB ;
Tuovinen, OH .
GEOMICROBIOLOGY JOURNAL, 2005, 22 (1-2) :11-25