MODELTEST: testing the model of DNA substitution

被引:18263
作者
Posada, D [1 ]
Crandall, KA [1 ]
机构
[1] Brigham Young Univ, Dept Zool, Provo, UT 84602 USA
关键词
D O I
10.1093/bioinformatics/14.9.817
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The program MODELTEST uses log likelihood scores to establish the model of DNA evolution that best fits the data.
引用
收藏
页码:817 / 818
页数:2
相关论文
共 12 条
[1]   NEW LOOK AT STATISTICAL-MODEL IDENTIFICATION [J].
AKAIKE, H .
IEEE TRANSACTIONS ON AUTOMATIC CONTROL, 1974, AC19 (06) :716-723
[2]   PHYLOGENIES FROM MOLECULAR SEQUENCES - INFERENCE AND RELIABILITY [J].
FELSENSTEIN, J .
ANNUAL REVIEW OF GENETICS, 1988, 22 :521-565
[3]   STATISTICAL TESTS OF MODELS OF DNA SUBSTITUTION [J].
GOLDMAN, N .
JOURNAL OF MOLECULAR EVOLUTION, 1993, 36 (02) :182-198
[4]   DATING OF THE HUMAN APE SPLITTING BY A MOLECULAR CLOCK OF MITOCHONDRIAL-DNA [J].
HASEGAWA, M ;
KISHINO, H ;
YANO, TA .
JOURNAL OF MOLECULAR EVOLUTION, 1985, 22 (02) :160-174
[5]   PHYLOGENY AND MOLECULAR EVOLUTION IN PRIMATES [J].
HASEGAWA, M .
JAPANESE JOURNAL OF GENETICS, 1990, 65 (04) :243-266
[6]   Phylogeny estimation and hypothesis testing using maximum likelihood [J].
Huelsenbeck, JP ;
Crandall, KA .
ANNUAL REVIEW OF ECOLOGY AND SYSTEMATICS, 1997, 28 :437-466
[7]  
JUKES T H, 1969, P21
[8]  
Kendall M., 1979, ADV THEORY STAT, V2, P240
[10]   THE GENERAL STOCHASTIC-MODEL OF NUCLEOTIDE SUBSTITUTION [J].
RODRIGUEZ, F ;
OLIVER, JL ;
MARIN, A ;
MEDINA, JR .
JOURNAL OF THEORETICAL BIOLOGY, 1990, 142 (04) :485-501