Constrained spin-density dynamics of an iron-sulfur complex: Ferredoxin cofactor

被引:14
作者
Ali, Md. Ehesan [1 ]
Nair, Nisanth N. [2 ]
Staemmler, Volker [1 ]
Marx, Dominik [1 ]
机构
[1] Ruhr Univ Bochum, Lehrstuhl Theoret Chem, D-44780 Bochum, Germany
[2] Indian Inst Technol, Dept Chem, Kanpur 208016, Uttar Pradesh, India
关键词
ab initio calculations; antiferromagnetic materials; exchange interactions (electron); iron compounds; molecular dynamics method; proteins; spin dynamics; MAGNETOSTRUCTURAL DYNAMICS; FUNCTIONAL THEORY; EXCHANGE INTERACTIONS; 2FE-2S FERREDOXIN; DFT CALCULATIONS; HUBBARD-U; TRANSITION; STATES; APPROXIMATION; PARAMETERS;
D O I
10.1063/1.4722552
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The computation of antiferromagnetic exchange coupling constants J by means of efficient density-based approaches requires in practice to take care of both spin projection to approximate the low spin ground state and proper localization of the magnetic orbitals at the transition metal centers. This is demonstrated here by a combined approach where the extended broken-symmetry (EBS) technique is employed to include the former aspect, while spin density constraints are applied to ensure the latter. This constrained EBS (CEBS) approach allows us to carry out ab initio molecular dynamics on a spin-projected low spin potential energy surface that is generated on-the-fly by propagating two coupled determinants and thereby accessing the antiferromagnetic coupling along the trajectory. When applied to the prototypical model of the oxidized [2Fe-2S] cofactor in Ferredoxins, [Fe2S2(SH)(4)](2-), at room temperature, CEBS leads to remarkably good results for geometrical structures and coupling constants J. (C) 2012 American Institute of Physics. [http://dx.doi.org/10.1063/1.4722552]
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页数:8
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