Simulating Chemical Kinetics Without Differential Equations: A Quantitative Theory Based on Chemical Pathways

被引:11
作者
Bai, Shirong [1 ]
Skodje, Rex T. [1 ]
机构
[1] Univ Colorado, Dept Chem & Biochem, Boulder, CO 80309 USA
来源
JOURNAL OF PHYSICAL CHEMISTRY LETTERS | 2017年 / 8卷 / 16期
基金
美国国家科学基金会;
关键词
HISTORIES REPRESENTATION; SUM; GRAPHS;
D O I
10.1021/acs.jpclett.7b01760
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
A new approach is presented for simulating the time evolution of chemically reactive systems. This method provides an alternative to conventional modeling of mass-action kinetics that involves solving differential equations for the species concentrations. The method presented here avoids the need to solve the rate equations by switching to a representation based on chemical pathways. In the Sum Over Histories Representation (or SOHR) method, any time-dependent kinetic observable, such as concentration, is written as a linear combination of probabilities for chemical pathways leading to a desired outcome. In this work, an iterative method is introduced that allows the time-dependent pathway probabilities to be generated from a knowledge of the elementary rate coefficients, thus avoiding the pitfalls involved in solving the differential equations of kinetics. The method is successfully applied to the model Lotka-Volterra system and to a realistic H-2 combustion model.
引用
收藏
页码:3826 / 3833
页数:8
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