Amycolatopsis saalfeldensis sp nov., a novel actinomycete isolated from a medieval alum slate mine

被引：27
作者：
Carlsohn, Marc Rene
Groth, Ingrid
Tan, Geok Yuan Annie
Schuetze, Barbara
Saluz, Hans-Peter
Munder, Thomas
Yang, Jun
Wink, Joachim
Goodfellow, Michael
机构：
[1] Hans Knoll Inst, Leibniz Inst Naturstoff Forsch & Infekt EV, D-07745 Jena, Germany
[2] Univ Malaya, Fac Sci, Div Microbiol, Inst Biol Sci, Kuala Lumpur 50603, Malaysia
[3] Univ Tubingen, Inst Biol, D-72076 Tubingen, Germany
[4] Sanofi Aventis Deutschland GmbH, D-65926 Frankfurt, Germany
[5] Univ Newcastle Upon Tyne, Div Biol, Newcastle Upon Tyne NE1 7RU, Tyne & Wear, England
来源：
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY | 2007年 / 57卷
关键词：
D O I：
10.1099/ijs.0.64903-0
中图分类号：
Q93 [微生物学];
学科分类号：
071005 ; 100705 ;
摘要：
Three actinomycetes isolated from the surfaces of rocks in a medieval slate mine were examined in a polyphasic taxonomic study. Chemotaxonomic and morphological characteristics of the isolates were typical of strains of the genus Amycolatopsis. The isolates had identical 16S rRNA gene sequences and formed a distinct phyletic line towards the periphery of the Amycolatopsis mediterranei clade, being most closely related to Amycolatopsis rifamycinica. The organisms shared a wide range of genotypic and phenotypic markers that distinguished them from their closest phylogenetic neighbours. On the basis of these results, a novel species, Amycolatopsis saalfeldensis sp. nov., is proposed. The type strain is HKI 0457(T) (=DSM 44993(T) = NRRL B-24474(T)).
引用
收藏
页码：1640 / 1646
页数：7
相关论文
共 46 条
[1]  
Altenburger P, 1996, J BIOTECHNOL, V47, P39, DOI 10.1016/0168-1656(96)01376-4
[2]  
Amoroso MJ, 2000, J BASIC MICROB, V40, P295, DOI 10.1002/1521-4028(200012)40:5/6<295::AID-JOBM295>3.0.CO
[3]  
2-Z
[4]   Reclassification of Amycolatopsis mediterranei DSM 46095 as Amycolatopsis rifamycinica sp nov. [J].
Bala, S ;
Khanna, R ;
Dadhwal, M ;
Prabagaran, SR ;
Shivaji, S ;
Cullum, J ;
Lal, R .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2004, 54 :1145-1149
[5]   CHEMICAL COMPOSITION OF CELL-WALL PREPARATIONS FROM STRAINS OF VARIOUS FORM-GENERA OF AEROBIC ACTINOMYCETES [J].
BECKER, B ;
LECHEVALIER, MP ;
LECHEVALIER, HA .
APPLIED MICROBIOLOGY, 1965, 13 (02) :236-+
[6]   Identification of a universally primed-PCR-derived sequence-characterized amplified region marker for an antagonistic strain of Clonostachys rosea and development of a strain-specific PCR detection assay [J].
Bulat, SA ;
Lübeck, M ;
Alekhina, IA ;
Jensen, DF ;
Knudsen, IMB ;
Lübeck, PS .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2000, 66 (11) :4758-4763
[7]  
COLLINS MD, 1980, J APPL BACTERIOL, V48, P459, DOI 10.1111/j.1365-2672.1980.tb01036.x
[8]   DISTRIBUTION OF MENAQUINONES IN ACTINOMYCETES AND CORYNEBACTERIA [J].
COLLINS, MD ;
PIROUZ, T ;
GOODFELLOW, M ;
MINNIKIN, DE .
JOURNAL OF GENERAL MICROBIOLOGY, 1977, 100 (JUN) :221-230
[9]   ISOLATION AND DIRECT COMPLETE NUCLEOTIDE DETERMINATION OF ENTIRE GENES - CHARACTERIZATION OF A GENE CODING FOR 16S-RIBOSOMAL RNA [J].
EDWARDS, U ;
ROGALL, T ;
BLOCKER, H ;
EMDE, M ;
BOTTGER, EC .
NUCLEIC ACIDS RESEARCH, 1989, 17 (19) :7843-7853
[10]  
FELSENSTEIN J, 1985, EVOLUTION, V39, P783, DOI 10.1111/j.1558-5646.1985.tb00420.x
12345