Inverse Temperature Dependence of Nuclear Quantum Effects in DNA Base Pairs

被引:56
作者
Fang, Wei [1 ,2 ]
Chen, Ji [1 ,3 ]
Rossi, Mariana [4 ]
Feng, Yexin [5 ]
Li, Xin-Zheng [6 ,7 ]
Michaelides, Angelos [1 ,3 ]
机构
[1] UCL, London Ctr Nanotechnol, Thomas Young Ctr, London WC1E 6BT, England
[2] UCL, Dept Chem, London WC1E 6BT, England
[3] UCL, Dept Phys & Astron, London WC1E 6BT, England
[4] Univ Oxford, Phys & Theoret Chem Lab, S Parks Rd, Oxford OX1 3QZ, England
[5] Hunan Univ, Sch Phys & Elect, Changsha 410082, Hunan, Peoples R China
[6] Peking Univ, Int Ctr Quantum Mat, Sch Phys, Beijing 100871, Peoples R China
[7] Peking Univ, Collaborat Innovat Ctr Quantum Matter, Beijing 100871, Peoples R China
基金
英国工程与自然科学研究理事会; 欧洲研究理事会; 中国博士后科学基金; 美国国家科学基金会;
关键词
INTEGRAL MOLECULAR-DYNAMICS; FREE-ENERGY DIFFERENCES; HYDROGEN-BOND; AB-INITIO; HEAVY-WATER; PROTON; MODEL; DENATURATION; MECHANISM; CATALYSIS;
D O I
10.1021/acs.jpclett.6b00777
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Despite the inherently quantum mechanical nature of hydrogen bonding, it is unclear how nuclear quantum effects (NQEs) alter the strengths of hydrogen bonds. With this in mind, we use ab initio path integral molecular dynamics to determine the absolute contribution of NQEs to the binding in DNA base pair complexes, arguably the most important hydrogen-bonded systems of all. We find that depending on the temperature, NQEs can either strengthen or weaken the binding within the hydrogen-bonded complexes. As a somewhat counterintuitive consequence, NQEs can have a smaller impact on hydrogen bond strengths at cryogenic temperatures than at room temperature. We rationalize this in terms of a competition of NQEs between low-frequency and high-frequency vibrational modes. Extending this idea, we also propose a simple model to predict the temperature dependence of NQEs on hydrogen bond strengths in general.
引用
收藏
页码:2125 / 2131
页数:7
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