Gene cloning, expression, crystallization and preliminary X-ray analysis of Thermus thermophilus arginyl-tRNA synthetase

被引:6
|
作者
Shimada, A
Nureki, O
Dohmae, N
Takio, K
Yokoyama, S
机构
[1] Univ Tokyo, Grad Sch Sci, Dept Biophys & Biochem, Bunkyo Ku, Tokyo 1130033, Japan
[2] RIKEN, Harima Inst, Cellular Signaling Lab, Mikazuki, Hyogo 6795148, Japan
[3] RIKEN, Div Biomol Characterizat, Wako, Saitama 3510198, Japan
关键词
D O I
10.1107/S0907444900016255
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The gene encoding the highly thermostable arginyl-tRNA synthetase (ArgRS) from Thermus thermophilus was cloned and overexpressed in Escherichia coli under the control of the T7 promoter. The recombinant ArgRS was purified by two chromatographic steps and was crystallized by the hanging-drop vapour-diffusion method using PEG 8000 and ethylene glycol as precipitants. The crystals belong to the hexagonal space group P6(5), with unit-cell parameters a = b = 156.04 (7), c = 87.17 (4) Angstrom. X-ray data to 2.8 Angstrom resolution were collected at room temperature from a native crystal using an inhouse X-ray source. Uranium, platinum and selenomethionine derivatives were found to be useful for phasing by the multiple isomorphous replacement method with anomalous scattering. The flash-frozen crystals diffracted beyond 2.3 Angstrom resolution using synchrotron radiation from the beamline 41XU at SPring-8 (Harima).
引用
收藏
页码:272 / 275
页数:4
相关论文
共 50 条
  • [41] Cloning, expression, crystallization and preliminary X-ray crystallographic analysis of glutamyl-tRNA synthetase (Xoo1504) from Xanthomonas oryzae pv. oryzae
    Doan, Thanh Thi Ngoc
    Natarajan, Sampath
    Kim, Hyesoon
    Ahn, Yeh-Jin
    Kim, Jeong-Gu
    Lee, Byoung-Moo
    Kang, Lin-Woo
    ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2009, 65 : 51 - 54
  • [42] PURIFICATION, CRYSTALLIZATION AND PRELIMINARY-X-RAY ANALYSIS OF INORGANIC PYROPHOSPHATASE FROM THERMUS-THERMOPHILUS
    OBMOLOVA, G
    KURANOVA, I
    TEPLYAKOV, A
    JOURNAL OF MOLECULAR BIOLOGY, 1993, 232 (01) : 312 - 313
  • [43] Purification, crystallization and preliminary X-ray diffraction analysis of the seryl-tRNA synthetase from Candida albicans
    Rocha, Rita
    Barbosa Pereira, Pedro Jose
    Santos, Manuel A. S.
    Macedo-Ribeiro, Sandra
    ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2011, 67 : 153 - 156
  • [44] Crystallization and preliminary X-ray crystallographic study of the editing domain of Thermus thermophilus isoleucyl-tRNA synthetase complexed with pre- and post-transfer editing-substrate analogues
    Fukunaga, R
    Yokoyama, S
    ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2004, 60 : 1900 - 1902
  • [45] Crystallization and preliminary X-ray diffraction data of an archaeal asparagine synthetase related to asparaginyl-tRNA synthetase
    Charron, C
    Roy, H
    Blaise, M
    Giegë, R
    Kern, D
    ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2004, 60 : 767 - 769
  • [46] Crystallization and preliminary X-ray diffraction study of mammalian mitochondrial seryl-tRNA synthetase
    Chimnaronk, S
    Jeppesen, MG
    Shimada, N
    Suzuki, T
    Nyborg, J
    Watanabe, K
    ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2004, 60 : 1319 - 1322
  • [47] Cloning, expression, purification, crystallization and preliminary X-ray crystallographic study of DHNA synthetase from Geobacillus kaustophilus
    Kanaujia, Shankar Prasad
    Ranjani, Chellamuthu Vasuki
    Jeyakanthan, Jeyaraman
    Baba, Seiki
    Kuroishi, Chizu
    Ebihara, Akio
    Shinkai, Akeo
    Kuramitsu, Seiki
    Shiro, Yoshitsugu
    Sekar, Kanagaraj
    Yokoyama, Shigeyuki
    ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2007, 63 : 103 - 105
  • [48] Overproduction, crystallization and preliminary X-ray diffraction analysis of probable ATP sulfurylase from Thermus thermophilus HB8
    Taguchi, Y
    Hoseki, J
    Kakuta, Y
    Fukuyama, K
    ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 2003, 59 : 1645 - 1647
  • [49] Crystallization and preliminary X-ray analysis of mannosyl-3-phosphoglycerate phosphatase from Thermus thermophilus HB27
    Goncalves, Susana
    Esteves, Ana M.
    Borges, Nuno
    Santos, Helena
    Matias, Pedro M.
    ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2011, 67 : 390 - 396
  • [50] Purification, crystallization and preliminary X-ray characterization of a human mitochondrial phenylalanyl-tRNA synthetase
    Levin, Inna
    Kessler, Naama
    Moor, Nina
    Klipcan, Liron
    Koc, Emine
    Templeton, Paul
    Spremulli, Linda
    Safro, Mark
    ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2007, 63 : 761 - 764