Flaviramulus aestuariivivens sp nov., isolated from a tidal flat

被引:4
作者
Park, Sooyeon [1 ]
Ha, Min-Ji [1 ]
Yoon, Sun Young [1 ]
Yoon, Jung-Hoon [1 ]
机构
[1] Sungkyunkwan Univ, Dept Food Sci & Biotechnol, Suwon, South Korea
关键词
tidal flat; polyphasic taxonomy; novel species; Flaviramulus aestuariivivens; SACCHAROMONOSPORA STRAINS; BACTERIAL SYSTEMATICS; RAPID IDENTIFICATION; GEN; NOV; DNA; FLAVOBACTERIACEAE; SEDIMENT; BASALTIS; FAMILY; LIPIDS;
D O I
10.1099/ijsem.0.001953
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-stain-negative, non-flagellated, non-gliding, aerobic and ovoid or rod-shaped bacterium, designated OITF-51(T), was isolated from a tidal flat in Oido, an island of South Korea, and subjected to a polyphasic taxonomic study. Strain OITF-51(T) grew optimally at 30 degrees C, at pH 7.0-8.0 and in the presence of 2.0% (w/v) NaCl. The neighbour-joining phylogenetic tree based on 16S rRNA gene sequences revealed that strain OITF-51(T) forms a cluster with the type strains of three species of the genus Flaviramulus. Strain OITF-51(T) exhibited 16S rRNA gene sequence similarity values of 97.0, 95.8 and 95.8% to the type strains of Flaviramulus ichthyoenteri, Flaviramulus basaltis and Flaviramulus aquimarinus, respectively, and of less than 96.5% to the type strains of other recognized species. Strain OITF-51(T) contained MK-6 as the predominant menaquinone and iso-C-15 : 1 G, iso-C-15 : 0, iso-C-15 : 0 3-OH and iso-C-17 : 0 3-OH as the major fatty acids. The major polar lipids detected in strain OITF-51(T) were phosphatidylethanolamine and one unidentified lipid. The DNA G+C content of strain OITF-51(T) was 33.4 mol%, and its mean DNA-DNA relatedness value with the type strain of F. ichthyoenteri was 13 %. Differential phenotypic properties, together with its phylogenetic and genetic distinctiveness, revealed that strain OITF-51(T) is separated from recognized species of the genus Flaviramulus. On the basis of the data presented, strain OITF-51(T) is considered to represent a novel species of the genus Flaviramulus, for which the name Flaviramulus aestuariivivens sp. nov. is proposed. The type strain is OITF-51(T) (= KCTC 52657(T) = NBRC 112707(T)).
引用
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页码:2337 / 2342
页数:6
相关论文
共 25 条
[1]  
Barrow GI., 1993, COWAN STEELS MANUAL, V3th
[2]  
Baumann P., 1981, The prokaryotes, P1302
[3]  
Bernardet J.-F., 2011, BERGEYS MANUAL SYSTE, V4, P106
[4]  
Bernardet JF, 2002, INT J SYST EVOL MICR, V52, P1049, DOI [10.1099/ijs.0.02136-0, 10.1099/00207713-52-3-1049]
[5]   Description of Cellulophaga algicola sp nov., isolated from the surfaces of Antarctic algae, and reclassification of Cytophaga uliginosa (ZoBell and Upham 1944) Reichenbach 1989 as Cellulophaga uliginosa comb. nov. [J].
Bowman, JP .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2000, 50 :1861-1868
[6]   Muricauda ruestringensis gen. nov., sp nov., a facultatively anaerobic, appendaged bacterium from German North Sea intertidal sediment [J].
Bruns, A ;
Rohde, M ;
Berthe-Corti, L .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2001, 51 :1997-2006
[7]   KINETIC STUDIES OF PIGMENT SYNTHESIS BY NON-SULFUR PURPLE BACTERIA [J].
COHENBAZIRE, G ;
SISTROM, WR ;
STANIER, RY .
JOURNAL OF CELLULAR AND COMPARATIVE PHYSIOLOGY, 1957, 49 (01) :25-68
[8]   Flaviramulus basaltis gen. nov., sp nov., a novel member of the family Flavobacteriaceae isolated from seafloor basalt [J].
Einen, Jorn ;
Ovreas, Lise .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2006, 56 :2455-2461
[9]  
Embley T. Martin, 1994, P121
[10]   FLUOROMETRIC DEOXYRIBONUCLEIC ACID DEOXYRIBONUCLEIC ACID HYBRIDIZATION IN MICRODILUTION WELLS AS AN ALTERNATIVE TO MEMBRANE-FILTER HYBRIDIZATION IN WHICH RADIOISOTOPES ARE USED TO DETERMINE GENETIC RELATEDNESS AMONG BACTERIAL STRAINS [J].
EZAKI, T ;
HASHIMOTO, Y ;
YABUUCHI, E .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1989, 39 (03) :224-229