Personalized CT-based radiomics nomogram preoperative predicting Ki-67 expression in gastrointestinal stromal tumors: a multicenter development and validation cohort

被引:71
作者
Zhang, Qing-Wei [1 ]
Gao, Yun-Jie [1 ]
Zhang, Ran-Ying [2 ,3 ]
Zhou, Xiao-Xuan [4 ]
Chen, Shuang-Li [5 ]
Zhang, Yan [1 ]
Liu, Qiang [6 ]
Xu, Jian-Rong [7 ]
Ge, Zhi-Zheng [1 ]
机构
[1] Shanghai Jiao Tong Univ, Shanghai Inst Digest Dis, Div Gastroenterol & Hepatol,Sch Med, Key Lab Gastroenterol & Hepatol,Minist Hlth,Renji, Shanghai, Peoples R China
[2] Fudan Univ, Zhongshan Hosp, Dept Radiol, Shanghai, Peoples R China
[3] Shanghai Inst Med Imaging, Shanghai, Peoples R China
[4] Zhejiang Univ, Sch Med, Dept Radiol, SRRSH, Hangzhou, Peoples R China
[5] Wenzhou Med Univ, Affiliated Hosp 1, Dept Radiol, Wenzhou 325000, Peoples R China
[6] Shanghai Jiao Tong Univ, Dept Pathol, Renji Hosp, Sch Med, Shanghai 200025, Peoples R China
[7] Shanghai Jiao Tong Univ, Renji Hosp, Sch Med, Dept Radiol, 1630 Dongfang Rd, Shanghai 200120, Peoples R China
关键词
Radiomic signature; Gastrointestinal stromal tumor; Ki-67; Prediction; CELL-CYCLE; MODELS; PROGNOSIS; IMMUNOHISTOCHEMISTRY; PROLIFERATION; MALIGNANCY; PATHOLOGY; KI67; KIT;
D O I
10.1186/s40169-020-0263-4
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Background and Aim To develop and validate radiomic prediction models using contrast-enhanced computed tomography (CE-CT) to preoperatively predict Ki-67 expression in gastrointestinal stromal tumors (GISTs). Method A total of 339 GIST patients from four centers were categorized into the training, internal validation, and external validation cohort. By filtering unstable features, minimum redundancy, maximum relevance, Least Absolute Shrinkage and Selection Operator (LASSO) algorithm, a radiomic signature was built to predict the malignant potential of GISTs. Individual nomograms of Ki-67 expression incorporating the radiomic signature or clinical factors were developed using the multivariate logistic model and evaluated regarding its calibration, discrimination, and clinical usefulness. Results The radiomic signature, consisting of 6 radiomic features had AUC of 0.787 [95% confidence interval (CI) 0.632-0.801], 0.765 (95% CI 0.683-0.847), and 0.754 (95% CI 0.666-0.842) in the prediction of high Ki-67 expression in the training, internal validation and external validation cohort, respectively. The radiomic nomogram including the radiomic signature and tumor size demonstrated significant calibration, and discrimination with AUC of 0.801 (95% CI 0.726-0.876), 0.828 (95% CI 0.681-0.974), and 0.784 (95% CI 0.701-0.868) in the training, internal validation and external validation cohort respectively. Based on the Decision curve analysis, the radiomics nomogram was found to be clinically significant and useful. Conclusions The radiomic signature from CE-CT was significantly associated with Ki-67 expression in GISTs. A nomogram consisted of radiomic signature, and tumor size had maximum accuracy in the prediction of Ki-67 expression in GISTs. Results from our study provide vital insight to make important preoperative clinical decisions.
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页数:11
相关论文
共 44 条
[1]  
Aoyagi K, 2009, INT SURG, V94, P1
[2]   KIT and PDGFRA mutations and PDGFRA immunostaining in gastrointestinal stromal tumors [J].
Barreca, Antonella ;
Fornari, Alessandro ;
Bonello, Lisa ;
Tondat, Fabrizio ;
Chiusa, Luigi ;
Lista, Patrizia ;
Pich, Achille .
MOLECULAR MEDICINE REPORTS, 2011, 4 (01) :3-8
[3]   Developed and validated a prognostic nomogram for recurrence-free survival after complete surgical resection of local primary gastrointestinal stromal tumors based on deep learning [J].
Chen, Tao ;
Liu, Shangqing ;
Li, Yong ;
Feng, Xingyu ;
Xiong, Wei ;
Zhao, Xixi ;
Yang, Yali ;
Zhang, Cangui ;
Hu, Yanfeng ;
Chen, Hao ;
Lin, Tian ;
Zhao, Mingli ;
Liu, Hao ;
Yu, Jiang ;
Xu, Yikai ;
Zhang, Yu ;
Li, Guoxin .
EBIOMEDICINE, 2019, 39 :272-279
[4]   Radiomics nomogram for predicting the malignant potential of gastrointestinal stromal tumours preoperatively [J].
Chen, Tao ;
Ning, Zhenyuan ;
Xu, Lili ;
Feng, Xingyu ;
Han, Shuai ;
Roth, Holger R. ;
Xiong, Wei ;
Zhao, Xixi ;
Hu, Yanfeng ;
Liu, Hao ;
Yu, Jiang ;
Zhang, Yu ;
Li, Yong ;
Xu, Yikai ;
Mori, Kensaku ;
Li, Guoxin .
EUROPEAN RADIOLOGY, 2019, 29 (03) :1074-1082
[5]   mRMRe: an R package for parallelized mRMR ensemble feature selection [J].
De Jay, Nicolas ;
Papillon-Cavanagh, Simon ;
Olsen, Catharina ;
El-Hachem, Nehme ;
Bontempi, Gianluca ;
Haibe-Kains, Benjamin .
BIOINFORMATICS, 2013, 29 (18) :2365-2368
[6]   COMPARING THE AREAS UNDER 2 OR MORE CORRELATED RECEIVER OPERATING CHARACTERISTIC CURVES - A NONPARAMETRIC APPROACH [J].
DELONG, ER ;
DELONG, DM ;
CLARKEPEARSON, DI .
BIOMETRICS, 1988, 44 (03) :837-845
[7]   Regularization Paths for Generalized Linear Models via Coordinate Descent [J].
Friedman, Jerome ;
Hastie, Trevor ;
Tibshirani, Rob .
JOURNAL OF STATISTICAL SOFTWARE, 2010, 33 (01) :1-22
[8]   Canine Gastrointestinal Stromal Tumors: Immunohistochemical Expression of CD34 and Examination of Prognostic Indicators Including Proliferation Markers Ki67 and AgNOR [J].
Gillespie, V. ;
Baer, K. ;
Farrelly, J. ;
Craft, D. ;
Luong, R. .
VETERINARY PATHOLOGY, 2011, 48 (01) :283-291
[9]   Machine learning-based radiomics strategy for prediction of cell proliferation in non-small cell lung cancer [J].
Gu, Qianbiao ;
Feng, Zhichao ;
Liang, Qi ;
Li, Meijiao ;
Deng, Jiao ;
Ma, Mengtian ;
Wang, Wei ;
Liu, Jianbin ;
Liu, Peng ;
Rong, Pengfei .
EUROPEAN JOURNAL OF RADIOLOGY, 2019, 118 :32-37
[10]   Epithelioid/mixed phenotype in gastrointestinal stromal tumors with KIT mutation from the stomach is associated with accelerated passage of late phases of the cell cycle and shorter disease-free survival [J].
Haller, Florian ;
Cortis, Judith ;
Helfrich, Joel ;
Cameron, Silke ;
Schueler, Philipp ;
Schwager, Stefanie ;
Gunawan, Bastian ;
Fuezesi, Laszlo ;
Agaimy, Abbas .
MODERN PATHOLOGY, 2011, 24 (02) :248-255