Cross-neutralizing antibodies bind a SARS-CoV-2 cryptic site and resist circulating variants

被引:58
作者
Li, Tingting [1 ,2 ]
Xue, Wenhui [1 ,2 ]
Zheng, Qingbing [1 ,2 ]
Song, Shuo [3 ,4 ]
Yang, Chuanlai [1 ,2 ]
Xiong, Hualong [1 ,2 ]
Zhang, Sibo [1 ,2 ]
Hong, Minqing [1 ,2 ]
Zhang, Yali [1 ,2 ]
Yu, Hai [1 ,2 ]
Zhang, Yuyun [1 ,2 ]
Sun, Hui [1 ,2 ]
Huang, Yang [1 ,2 ]
Deng, Tingting [1 ,2 ]
Chi, Xin [1 ,2 ]
Li, Jinjin [1 ,2 ]
Wang, Shaojuan [1 ,2 ]
Zhou, Lizhi [1 ,2 ]
Chen, Tingting [1 ,2 ]
Wang, Yingbin [1 ,2 ]
Cheng, Tong [1 ,2 ]
Zhang, Tianying [1 ,2 ]
Yuan, Quan [1 ,2 ]
Zhao, Qinjian [1 ,2 ]
Zhang, Jun [1 ,2 ]
McLellan, Jason S. [5 ]
Zhou, Z. Hong [6 ,7 ]
Zhang, Zheng [3 ,4 ]
Li, Shaowei [1 ,2 ]
Gu, Ying [1 ,2 ]
Xia, Ningshao [1 ,2 ,8 ]
机构
[1] Xiamen Univ, Sch Life Sci, Sch Publ Hlth, State Key Lab Mol Vaccinol & Mol Diagnost, Xiamen 361102, Fujian, Peoples R China
[2] Xiamen Univ, Natl Inst Diagnost & Vaccine Dev Infect Dis, Xiamen 361102, Fujian, Peoples R China
[3] Shenzhen Third Peoples Hosp, Natl Clin Res Ctr Infect Dis, Inst Hepatol, Shenzhen 518112, Guangdong, Peoples R China
[4] Southern Univ Sci & Technol, Sch Med, Affiliated Hosp 2, Shenzhen 518112, Guangdong, Peoples R China
[5] Univ Texas Austin, Dept Mol Biosci, Austin, TX 78712 USA
[6] Univ Calif Los Angeles, Calif NanoSyst Inst CNSI, Los Angeles, CA 90095 USA
[7] Univ Calif Los Angeles, Dept Microbiol Immunol & Mol Genet, Los Angeles, CA 90095 USA
[8] Chinese Acad Med Sci, Res Unit Frontier Technol Struct Vaccinol, Xiamen 518112, Fujian, Peoples R China
基金
中国国家自然科学基金;
关键词
CRYO-EM STRUCTURE; INFLUENZA; INFECTION; PROTECT; DOMAIN; VIRUS; SPIKE; IGG;
D O I
10.1038/s41467-021-25997-3
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The emergence of numerous variants of SARS-CoV-2, the causative agent of COVID-19, has presented new challenges to the global efforts to control the COVID-19 pandemic. Here, we obtain two cross-neutralizing antibodies (7D6 and 6D6) that target Sarbecoviruses' receptor-binding domain (RBD) with sub-picomolar affinities and potently neutralize authentic SARS-CoV-2. Crystal structures show that both antibodies bind a cryptic site different from that recognized by existing antibodies and highly conserved across Sarbecovirus isolates. Binding of these two antibodies to the RBD clashes with the adjacent N-terminal domain and disrupts the viral spike. Both antibodies confer good resistance to mutations in the currently circulating SARS-CoV-2 variants. Thus, our results have direct relevance to public health as options for passive antibody therapeutics and even active prophylactics. They can also inform the design of pan-sarbecovirus vaccines. Antibodies (Abs) targeting highly conserved epitopes are important tools against emerging virus variants. Here, the authors characterize Abs that recognize a cryptic epitope in the receptor-binding domain of SARS-CoV-2 spike that is well conserved and show that these Abs can neutralize several variants of concerns.
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页数:12
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