Pan-cancer analysis of nemo-like kinase (NLK) expression convergence to pancreatic adenocarcinoma that has diagnostic, prognostic and treatment value

被引:0
作者
Wu, Yuefeng [1 ]
Fu, Yutong [1 ]
He, Kangning [1 ]
Song, Hai [2 ,3 ]
机构
[1] Zhejiang Univ, Zhejiang Univ Sch Med, Zhejiang Univ Univ Edinburgh Inst, Haining, Zhejiang, Peoples R China
[2] Zhejiang Univ, Life Sci Inst, Hangzhou, Zhejiang, Peoples R China
[3] Zhejiang Univ, Innovat Ctr Cell Signaling Network, Hangzhou, Zhejiang, Peoples R China
来源
GENE REPORTS | 2021年 / 24卷
关键词
TCGA; GEO; Nemo-like kinase; Pancreatic cancer; GENE-EXPRESSION;
D O I
10.1016/j.genrep.2021.101260
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Background: Nemo-like kinase (NLK) is an evolutionarily conserved mitogen-activated protein (MAP) kinase-related kinase. Nemo-like kinase (NLK) can not only undergo autophosphorylation but is also involved in many critical signaling pathways as a regulator of tumorigenesis. In recent years, accumulating shreds of evidence have suggested that NLK is a crucial molecule regulating the occurrence and development of various tumors. Abnormal expression of NLK not only participates in cancer cell growth, proliferation, migration, and apoptosis, but also has significant reference value for disease prognosis. Moreover, in different types of cancer, the effects of NLK over- or under-expression are not consistent. Despite these advances, no studies comprehensively describe the significance of Nemo-like kinase expression in all 33 kinds of cancer, or have evaluated its prognostic value. Materials & methods: A total of 10,201 samples were obtained from the GDC data portal and four groups of GEO datasets were collected for verification. A variety of bioinformatics analysis methods were used to reveal the roles of NLK in the diagnosis, treatment, and prognosis of tumor patients. Conclusion: NLK is significantly overexpressed in pancreatic adenocarcinoma (PAAD) tissues than normal controls. The NLK expression in PAAD is also different in different pathological stages. NLK is a prognostic biomarker and is correlated with immune infiltrates in PAAD. The abnormal expression of NLK in PAAD will influence the expression of a variety of genes, whose functions are enriched in multiple metabolism, hormone secretion, and even neuron regulation pathways. More importantly, the IHC slides for PAAD and corresponding normal tissues were significantly different, which can be used in clinical diagnosis.
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页数:14
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共 56 条
  • [11] Chen BB, 2018, METHODS MOL BIOL, V1711, P243, DOI 10.1007/978-1-4939-7493-1_12
  • [12] Turning foes to friends: targeting cancer-associated fibroblasts
    Chen, Xueman
    Song, Erwei
    [J]. NATURE REVIEWS DRUG DISCOVERY, 2019, 18 (02) : 99 - 115
  • [13] Clinical and biological significance of Nemo-like kinase expression in glioma
    Cui, Gang
    Li, Zhen
    Shao, Bai
    Zhao, Li
    Zhou, Yanfeng
    Lu, Ting
    Wang, Junxiang
    Shi, Xioayong
    Wang, Jinjin
    Zuo, Gang
    Zhu, Weiwei
    Shen, Aiguo
    [J]. JOURNAL OF CLINICAL NEUROSCIENCE, 2011, 18 (02) : 271 - 275
  • [14] CD8+ cytotoxic T lymphocytes in cancer immunotherapy: A review
    Farhood, Bagher
    Najafi, Masoud
    Mortezaee, Keywan
    [J]. JOURNAL OF CELLULAR PHYSIOLOGY, 2019, 234 (06) : 8509 - 8521
  • [15] Molecular and pharmacological modulators of the tumor immune contexture revealed by deconvolution of RNA-seq data
    Finotello, Francesca
    Mayer, Clemens
    Plattner, Christina
    Laschober, Gerhard
    Rieder, Dietmar
    Hackl, Hubert
    Krogsdam, Anne
    Loncova, Zuzana
    Posch, Wilfried
    Wilflingseder, Doris
    Sopper, Sieghart
    Ijsselsteijn, Marieke
    Brouwer, Thomas P.
    Johnson, Douglas
    Xu, Yaomin
    Wang, Yu
    Sanders, Melinda E.
    Estrada, Monica V.
    Ericsson-Gonzalez, Paula
    Charoentong, Pornpimol
    Balko, Justin
    de Miranda, Noel Filipe da Cunha Carvahlo
    Trajanoski, Zlatko
    [J]. GENOME MEDICINE, 2019, 11 (1)
  • [16] Pan-cancer RNA-seq data stratifies tumours by some hallmarks of cancer
    Frost, F. Graeme
    Cherukuri, Praveen F.
    Milanovich, Samuel
    Boerkoel, Cornelius F.
    [J]. JOURNAL OF CELLULAR AND MOLECULAR MEDICINE, 2020, 24 (01) : 418 - 430
  • [17] Integrative Analysis of Complex Cancer Genomics and Clinical Profiles Using the cBioPortal
    Gao, Jianjiong
    Aksoy, Buelent Arman
    Dogrusoz, Ugur
    Dresdner, Gideon
    Gross, Benjamin
    Sumer, S. Onur
    Sun, Yichao
    Jacobsen, Anders
    Sinha, Rileen
    Larsson, Erik
    Cerami, Ethan
    Sander, Chris
    Schultz, Nikolaus
    [J]. SCIENCE SIGNALING, 2013, 6 (269) : pl1
  • [18] Goriacheva T V, 1989, Biull Eksp Biol Med, V107, P139
  • [19] Cancer biomarker discovery and translation: proteomics and beyond
    Hristova, Ventzislava A.
    Chan, Daniel W.
    [J]. EXPERT REVIEW OF PROTEOMICS, 2019, 16 (02) : 93 - 103
  • [20] Nerve input to tumours: Pathophysiological consequences of a dynamic relationship
    Hutchings, Charlotte
    Phillips, Jade A.
    Djamgoz, Mustafa B. A.
    [J]. BIOCHIMICA ET BIOPHYSICA ACTA-REVIEWS ON CANCER, 2020, 1874 (02):