Epigenetic Therapies and Biomarkers in Breast Cancer

被引:26
作者
Brown, Lauren Julia [1 ,2 ]
Achinger-Kawecka, Joanna [1 ,2 ]
Portman, Neil [1 ,2 ]
Clark, Susan [1 ,2 ]
Stirzaker, Clare [1 ,2 ]
Lim, Elgene [1 ,2 ]
机构
[1] Univ New South Wales UNSW, Sch Clin Med, St Vincents Campus, Darlinghurst, NSW 2010, Australia
[2] Garvan Inst Med Res, Darlinghurst, NSW 2010, Australia
关键词
breast cancer; biomarkers; epigenetics; epigenetic therapy; SUBEROYLANILIDE HYDROXAMIC ACID; HISTONE DEACETYLASE INHIBITOR; DNA METHYLATION PATTERNS; CIRCULATING TUMOR DNA; PHASE-II; LOCALLY RECURRENT; VIRAL MIMICRY; DOUBLE-BLIND; OPEN-LABEL; SERUM DNA;
D O I
10.3390/cancers14030474
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Simple Summary Epigenetic therapies are promising agents for overcoming clinical resistance to conventional treatments in breast cancer. In the assessed trials, the use of epigenetic therapies for the management of breast cancer has not translated from the pre-clinical to clinical setting. However, novel epigenetic treatments remain promising, especially in the era of personalized medicine and improved genomic evaluation. The aim of our review was to assess the published evidence for the clinical utility of epigenetic therapies and their biomarkers in breast cancer and the potential value of epigenetic biomarkers to direct clinical management. Epigenetic therapies remain a promising, but still not widely used, approach in the management of patients with cancer. To date, the efficacy and use of epigenetic therapies has been demonstrated primarily in the management of haematological malignancies, with limited supportive data in solid malignancies. The most studied epigenetic therapies in breast cancer are those that target DNA methylation and histone modification; however, none have been approved for routine clinical use. The majority of pre-clinical and clinical studies have focused on triple negative breast cancer (TNBC) and hormone-receptor positive breast cancer. Even though the use of epigenetic therapies alone in the treatment of breast cancer has not shown significant clinical benefit, these therapies show most promise in use in combinations with other treatments. With improving technologies available to study the epigenetic landscape in cancer, novel epigenetic alterations are increasingly being identified as potential biomarkers of response to conventional and epigenetic therapies. In this review, we describe epigenetic targets and potential epigenetic biomarkers in breast cancer, with a focus on clinical trials of epigenetic therapies. We describe alterations to the epigenetic landscape in breast cancer and in treatment resistance, highlighting mechanisms and potential targets for epigenetic therapies. We provide an updated review on epigenetic therapies in the pre-clinical and clinical setting in breast cancer, with a focus on potential real-world applications. Finally, we report on the potential value of epigenetic biomarkers in diagnosis, prognosis and prediction of response to therapy, to guide and inform the clinical management of breast cancer patients.
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页数:20
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共 139 条
[1]  
Achinger-Kawecka J., 2023, Biorxiv, p2021.06.21.449340, DOI DOI 10.1101/2021.06.21.449340
[2]   Epigenetic reprogramming at estrogen-receptor binding sites alters 3D chromatin landscape in endocrine-resistant breast cancer [J].
Achinger-Kawecka, Joanna ;
Valdes-Mora, Fatima ;
Luu, Phuc-Loi ;
Giles, Katherine A. ;
Caldon, C. Elizabeth ;
Qu, Wenjia ;
Nair, Shalima ;
Soto, Sebastian ;
Locke, Warwick J. ;
Yeo-Teh, Nicole S. ;
Gould, Cathryn M. ;
Du, Qian ;
Smith, Grady C. ;
Ramos, Irene R. ;
Fernandez, Kristine F. ;
Hoon, Dave S. ;
Gee, Julia M. W. ;
Stirzaker, Clare ;
Clark, Susan J. .
NATURE COMMUNICATIONS, 2020, 11 (01)
[3]   Perspective: The future of liquid biopsy [J].
Alix-Panabieres, Catherine .
NATURE, 2020, 579 (7800) :S9-S9
[4]   Phase I and pharmacodynamic trial of the DNA methyltransferase inhibitor decitabine and carboplatin in solid tumors [J].
Appleton, Kim ;
Mackay, Helen J. ;
Judson, Ian ;
Plumb, Jane A. ;
McCormick, Carol ;
Strathdee, Gordon ;
Lee, Chooi ;
Barrett, Sophie ;
Reade, Sarah ;
Jadayel, Dalal ;
Tang, Adrian ;
Bellenger, Katharine ;
Mackay, Lynsay ;
Setanoians, Albert ;
Schaetzlein, Andreas ;
Twelves, Chris ;
Kaye, Stanley B. ;
Brown, Robert .
JOURNAL OF CLINICAL ONCOLOGY, 2007, 25 (29) :4603-4609
[5]   DNA methylation of distal regulatory sites characterizes dysregulation of cancer genes [J].
Aran, Dvir ;
Sabato, Sivan ;
Hellman, Asaf .
GENOME BIOLOGY, 2013, 14 (03)
[6]   Valproic acid, a histone deacetylase inhibitor, induces apoptosis in breast cancer stem cells [J].
Aztopal, Nazlihan ;
Erkisa, Merve ;
Erturk, Elif ;
Ulukaya, Engin ;
Tokullugil, Asuman Hatice ;
Ari, Ferda .
CHEMICO-BIOLOGICAL INTERACTIONS, 2018, 280 :51-58
[7]   Regulation of chromatin by histone modifications [J].
Bannister, Andrew J. ;
Kouzarides, Tony .
CELL RESEARCH, 2011, 21 (03) :381-395
[8]   Epigenetic Therapies for Cancer [J].
Bates, Susan E. .
NEW ENGLAND JOURNAL OF MEDICINE, 2020, 383 (07) :650-663
[9]   DNA methylation landscapes of 1538 breast cancers reveal a replication-linked clock, epigenomic instability and cis-regulation [J].
Batra, Rajbir Nath ;
Lifshitz, Aviezer ;
Vidakovic, Ana Tufegdzic ;
Chin, Suet-Feung ;
Sati-Batra, Ankita ;
Sammut, Stephen-John ;
Provenzano, Elena ;
Ali, H. Raza ;
Dariush, Ali ;
Bruna, Alejandra ;
Murphy, Leigh ;
Purushotham, Arnie ;
Ellis, Ian ;
Green, Andrew ;
Garrett-Bakelman, Francine E. ;
Mason, Chris ;
Melnick, Ari ;
Aparicio, Samuel A. J. R. ;
Rueda, Oscar M. ;
Tanay, Amos ;
Caldas, Carlos .
NATURE COMMUNICATIONS, 2021, 12 (01)
[10]   A phase I study of 5-azacytidine and erlotinib in advanced solid tumor malignancies [J].
Bauman, Julie ;
Verschraegen, Claire ;
Belinsky, Steven ;
Muller, Carolyn ;
Rutledge, Teresa ;
Fekrazad, M. ;
Ravindranathan, Meera ;
Lee, Sang-Joon ;
Jones, Dennie .
CANCER CHEMOTHERAPY AND PHARMACOLOGY, 2012, 69 (02) :547-554