Integrated analysis of exosomal lncRNA and mRNA expression profiles reveals the involvement of lnc-MKRN2-42:1 in the pathogenesis of Parkinson's disease

被引:58
|
作者
Wang, Qiao [1 ,2 ]
Han, Chun-Lei [1 ,2 ]
Wang, Kai-Liang [1 ,2 ]
Sui, Yun-Peng [1 ,2 ]
Li, Zhi-Bao [1 ,2 ]
Chen, Ning [3 ]
Fan, Shi-Ying [1 ,2 ]
Shimabukuro, Michitomo [1 ,2 ]
Wang, Feng [4 ]
Meng, Fan-Gang [1 ,2 ,3 ]
机构
[1] Capital Med Univ, Beijing Neurosurg Inst, Dept Funct Neurosurg, Beijing, Peoples R China
[2] Beijing Key Lab Neurostimulat, Beijing, Peoples R China
[3] Capital Med Univ, Beijing Tiantan Hosp, Dept Neurosurg, Beijing, Peoples R China
[4] Ningxia Med Univ, Gen Hosp, Dept Neurosurg, 804 Shengli St, Yinchuan 750001, Ningxia, Peoples R China
基金
中国国家自然科学基金;
关键词
exosome; Lnc-MKRN2-42; 1; MDS-UPDRS III; next-generation sequencing; Parkinson's disease; LONG NONCODING RNA; ALPHA-SYNUCLEIN; SUBSTANTIA-NIGRA; MODEL;
D O I
10.1111/cns.13277
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
Background Parkinson's disease (PD) is a common movement disorder for which diagnosis mainly depends on the medical history and clinical symptoms. Exosomes are now considered an additional mechanism for intercellular communication, allowing cells to exchange proteins, lipids, and genetic material. Long noncoding (lnc) RNA in exosomes plays a critical role in many diseases, including neurodegenerative disease. Aim To study expression differences for lncRNAs in peripheral blood exosomes of PD patients compared with healthy individuals and to look for lncRNAs that might be related to the pathogenesis of PD. Materials and Methods We recruited PD patients along with age- and sex-matched healthy individuals as healthy controls and evaluated levels of lncRNAs extracted from exosomes in plasma samples via next-generation sequencing and real-time quantitative PCR. Correlation analysis was conducted for the clinical characteristics of PD patients and the expression of selected lncRNAs. Results We found 15 upregulated and 24 downregulated exosomal lncRNAs in the PD group. According to bioinformatics analyses, we chose lnc-MKRN2-42:1 for further study. Interestingly, lnc-MKRN2-42:1 was positively correlated with the MDS-UPDRS III score for PD patients. Conclusion Our study suggested that lnc-MKRN2-42:1 may be involved in the occurrence and development of PD.
引用
收藏
页码:527 / 537
页数:11
相关论文
共 45 条
  • [21] Genome-scale methylation analysis of Parkinson's disease patients' brains reveals DNA hypomethylation and increased mRNA expression of cytochrome P450 2E1
    Kaut, Oliver
    Schmitt, Ina
    Wuellner, Ullrich
    NEUROGENETICS, 2012, 13 (01) : 87 - 91
  • [22] Genome-scale methylation analysis of Parkinson's disease patients' brains reveals DNA hypomethylation and increased mRNA expression of cytochrome P450 2E1
    Oliver Kaut
    Ina Schmitt
    Ullrich Wüllner
    neurogenetics, 2012, 13 : 87 - 91
  • [23] A systematic integrated analysis of brain expression profiles reveals YAP1 and other prioritized hub genes as important upstream regulators in Alzheimer's disease
    Xu, Min
    Zhang, Deng-Feng
    Luo, Rongcan
    Wu, Yong
    Zhou, Hejiang
    Kong, Li-Li
    Bi, Rui
    Yao, Yong-Gang
    ALZHEIMERS & DEMENTIA, 2018, 14 (02) : 215 - 229
  • [24] Integrated analysis of long non-coding RNAs (lncRNAs) and mRNA expression profiles identifies lncRNA PRKG1-AS1 playing important roles in skeletal muscle aging
    Zheng, Yan
    Liu, Ting
    Li, Qun
    Li, Jie
    AGING-US, 2021, 13 (11): : 15044 - 15060
  • [25] Integrated transcriptome expression profiling reveals a novel lncRNA associated with L-DOPA-induced dyskinesia in a rat model of Parkinson's disease (vol 15, page 1699, 2023)
    Han, Chun-Lei
    Liu, Yun-Peng
    Sui, Yun-Peng
    Chen, Ning
    Du, Ting-Ting
    Jiang, Ying
    Guo, Chen-Jia
    Wang, Kai-Liang
    Wang, Qiao
    Fan, Shi-Ying
    Shimabukuro, Michitomo
    Meng, Fan-Gang
    Yuan, Fang
    Zhang, Jian-Guo
    AGING-US, 2023, 15 (05): : 33 - 33
  • [26] Integrated Analysis Reveals Altered Lipid and Glucose Metabolism and Identifies NOTCH2 as a Biomarker for Parkinson's Disease Related Depression
    Dong, Mei-Xue
    Feng, Xia
    Xu, Xiao-Min
    Hu, Ling
    Liu, Yang
    Jia, Si-Yu
    Li, Bo
    Chen, Wei
    Wei, You-Dong
    FRONTIERS IN MOLECULAR NEUROSCIENCE, 2018, 11
  • [27] Involvement of casein kinase 1 epsilon/delta (Csnk1e/d) in the pathogenesis of familial Parkinson's disease caused by CHCHD2
    Torii, Satoru
    Arakawa, Satoko
    Sato, Shigeto
    Ishikawa, Kei-ichi
    Taniguchi, Daisuke
    Sakurai, Hajime Tajima
    Honda, Shinya
    Hiraoka, Yuuichi
    Ono, Masaya
    Akamatsu, Wado
    Hattori, Nobutaka
    Shimizu, Shigeomi
    EMBO MOLECULAR MEDICINE, 2023, 15 (09)
  • [28] Integrated Metabolomic and Lipidomic Analysis Reveals the Neuroprotective Mechanisms of Bushen Tiansui Formula in an Aβ1-42-Induced Rat Model of Alzheimer's Disease
    Yi, Min
    Zhang, Chunhu
    Zhang, Zheyu
    Yi, Pengji
    Xu, Panpan
    Huang, Jianhua
    Peng, Weijun
    OXIDATIVE MEDICINE AND CELLULAR LONGEVITY, 2020, 2020
  • [29] An edge-based statistical analysis of long non-coding RNA expression profiles reveals a negative association between Parkinson's disease and colon cancer
    Tian, Suyan
    Zhang, Mingyue
    Ma, Zhiming
    BMC MEDICAL GENOMICS, 2021, 14 (01)
  • [30] An edge-based statistical analysis of long non-coding RNA expression profiles reveals a negative association between Parkinson’s disease and colon cancer
    Suyan Tian
    Mingyue Zhang
    Zhiming Ma
    BMC Medical Genomics, 14