Structures of SAP-1 bound to DNA targets from the E74 and c-fos promoters: Insights into DNA sequence discrimination by ETS proteins

被引:96
作者
Mo, Y
Vaessen, B
Johnston, K
Marmorstein, R [1 ]
机构
[1] Univ Penn, Wistar Inst, Philadelphia, PA 19104 USA
[2] Univ Penn, Dept Chem, Philadelphia, PA 19104 USA
基金
美国国家卫生研究院;
关键词
D O I
10.1016/S1097-2765(00)80130-6
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
SAP-1 is a member of the Ets transcription factors and cooperates with SRF protein to activate transcription of the c-fos protooncogene. The crystal structures of the conserved ETS domain of SAP-1 bound to DNA sequences from the E74 and c-fos promoters reveal that a set of conserved residues contact a GGA core DNA sequence. Discrimination for sequences outside this core is mediated by DNA contacts from conserved and nonconserved protein residues and sequence-dependent DNA structural properties characteristic of A-form DNA structure. Comparison with the related PU.1/DNA and GABP alpha/beta/DNA complexes provides general insights into DNA discrimination between Ets proteins. Modeling studies of a SAP-1/SRF/DNA complex suggest that SRF may modulate SAP-1 binding to DNA by interacting with its ETS domain.
引用
收藏
页码:201 / 212
页数:12
相关论文
共 69 条
[11]   CRYSTALLOGRAPHIC R-FACTOR REFINEMENT BY MOLECULAR-DYNAMICS [J].
BRUNGER, AT ;
KURIYAN, J ;
KARPLUS, M .
SCIENCE, 1987, 235 (4787) :458-460
[12]   Signalling pathways: Jack of all cascades [J].
Cahill, MA ;
Janknecht, R ;
Nordheim, A .
CURRENT BIOLOGY, 1996, 6 (01) :16-19
[13]   CO-CRYSTAL STRUCTURE OF THE HNF-3/FORK HEAD DNA-RECOGNITION MOTIF RESEMBLES HISTONE-H5 [J].
CLARK, KL ;
HALAY, ED ;
LAI, ES ;
BURLEY, SK .
NATURE, 1993, 364 (6436) :412-420
[14]   CHARACTERIZATION OF SAP-1, A PROTEIN RECRUITED BY SERUM RESPONSE FACTOR TO THE C-FOS SERUM RESPONSE ELEMENT [J].
DALTON, S ;
TREISMAN, R .
CELL, 1992, 68 (03) :597-612
[15]  
DICKERSON RE, 1992, METHOD ENZYMOL, V211, P67
[16]   Collaborative computational project, number 4: Providing programs for protein crystallography [J].
Dodson, EJ ;
Winn, M ;
Ralph, A .
MACROMOLECULAR CRYSTALLOGRAPHY, PT B, 1997, 277 :620-633
[17]   Solution structure of the ETS domain from murine Ets-1: A winged helix-turn-helix DNA binding motif [J].
Donaldson, LW ;
Petersen, JM ;
Graves, BJ ;
McIntosh, LP .
EMBO JOURNAL, 1996, 15 (01) :125-134
[18]   THE GCN4 BASIC REGION LEUCINE ZIPPER BINDS DNA AS A DIMER OF UNINTERRUPTED ALPHA-HELICES - CRYSTAL-STRUCTURE OF THE PROTEIN-DNA COMPLEX [J].
ELLENBERGER, TE ;
BRANDL, CJ ;
STRUHL, K ;
HARRISON, SC .
CELL, 1992, 71 (07) :1223-1237
[19]   Structure of IRF-1 with bound DNA reveals determinants of interferon regulation [J].
Escalante, CR ;
Yie, JM ;
Thanos, D ;
Aggarwal, AK .
NATURE, 1998, 391 (6662) :103-106
[20]   SETOR - HARDWARE-LIGHTED 3-DIMENSIONAL SOLID MODEL REPRESENTATIONS OF MACROMOLECULES [J].
EVANS, SV .
JOURNAL OF MOLECULAR GRAPHICS, 1993, 11 (02) :134-&